RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SELEP16581 610 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ITGA2P17301 1181 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ADRA2CP18825 462 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PYCR1P32322 319 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PMELP40967 661 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 RPS27P42677 84 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GUCA1AP43080 201 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GSSP48637 474 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PCBD1P61457 104 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 HIST1H3AP68431 136 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 MRPS11P82912 194 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PCGF3Q3KNV8 242 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 MTX3Q5HYI7 312 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 FAM201AQ5SY85 155 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ZNF362Q5T0B9 420 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 HIST2H3PS2Q5TEC6 136 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GPR139Q6DWJ6 353 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 OR2T2Q6IF00 324 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 FAHD2BQ6P2I3 314 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PGBD2Q6P3X8 592 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 SMARCD3Q6STE5 483 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 HIST2H3AQ71DI3 136 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ZDHHC21Q8IVQ6 265 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GLB1L2Q8IW92 636 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 SDR9C7Q8NEX9 313 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 OR52E2Q8NGJ4 325 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 OR4C15Q8NGM1 316 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 OR8D4Q8NGM9 314 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 OR1F12Q8NHA8 337 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 FNDC8Q8TC99 324 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GNPDA2Q8TDQ7 276 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ITLN1Q8WWA0 313 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PTP4A1Q93096 173 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 HAVCR1Q96D42 359 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 FAHD2AQ96GK7 314 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 NSL1Q96IY1 281 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 CLPTM1LQ96KA5 538 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 NSMCE2Q96MF7 247 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 CCT8L2Q96SF2 557 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 PLA2G12AQ9BZM1 189 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 METTL17Q9H7H0 456 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 SAP30LQ9HAJ7 183 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ELOVL3Q9HB03 270 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 RPRD1BQ9NQG5 326 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 MMP26Q9NRE1 261 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 TBCCD1Q9NVR7 557 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 MRPL22Q9NWU5 206 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 GPR160Q9UJ42 338 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 SAMD4AQ9UPU9 718 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 ARL2BPQ9Y2Y0 163 aa6.17□□□□□ -1.42
PRPF4B-208ENST00000490653 TVP23AA6NH52 213 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 TRAPPC2LH3BP13 241 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 AHCYL1O43865 530 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 GMNNO75496 209 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 FABP3P05413 133 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 CD55P08174 381 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ADH4P08319 380 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 KITLGP21583 273 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 THBS2P35442 1172 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 GDNFP39905 211 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 RPS6KA3P51812 740 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ARHGDIAP52565 204 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 HMGA2P52926 109 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 SEC61A1P61619 476 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 LSM6P62312 80 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 LCN2P80188 198 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 TNFAIP6P98066 277 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 TEKQ02763 1124 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 SCRN3Q0VDG4 424 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 MOGQ16653 247 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 HFEQ30201 348 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 SAMD4BQ5PRF9 694 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 CLEC12AQ5QGZ9 265 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ZNF770Q6IQ21 691 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ACSM5Q6NUN0 579 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 CFAP77Q6ZQR2 320 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 GLCCI1Q86VQ1 547 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 CYB561A3Q8NBI2 242 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 NPEPL1Q8NDH3 523 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 SLC26A10Q8NG04 563 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 OR2Z1Q8NG97 314 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 OR51L1Q8NGJ5 315 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 OR4Q3Q8NH05 313 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ZNF420Q8TAQ5 688 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 ELMOD3Q96FG2 381 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 BTBD10Q9BSF8 475 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 IFT27Q9BW83 186 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 IL1RAPQ9NPH3 570 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 PNRC2Q9NPJ4 139 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 UBAP1Q9NZ09 502 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 OPN4Q9UHM6 478 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 MAGEL2Q9UJ55 1249 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 NDRG4Q9ULP0 352 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 LYVE1Q9Y5Y7 322 aa6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 SOX21Q9Y651 276 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-208ENST00000490653 TANC2Q9HCD6 1990 aa6.15□□□□□ -1.42
PRPF4B-208ENST00000490653 PLSCR5A0PG75 271 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms