RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ANGPT4Q9Y264 503 aa11.09□□□□□ -0.63
EXOSC3-207ENST00000490516 TRAV38-1A0A0B4J264 116 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 A0A1B0GWJ7 208 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 OOEPA6NGQ2 149 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 UBE2E1P51965 193 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 ELF3P78545 371 aaPredicted RBP11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 HHATQ5VTY9 493 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 CCDC121Q6ZUS5 278 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 HDDC2Q7Z4H3 204 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 AENQ8WTP8 325 aaKnown RBP11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 ERGIC1Q969X5 290 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 WDR76Q9H967 626 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 EMC7Q9NPA0 242 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 INIPQ9NRY2 104 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 LSM4Q9Y4Z0 139 aaKnown RBP11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 STARD9Q9P2P6 4700 aa11.08□□□□□ -0.64
EXOSC3-207ENST00000490516 SMIM23A6NLE4 172 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 C12orf71A8MTZ7 269 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 SGCEO43556 437 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 NDUFA2O43678 99 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 CHP2O43745 196 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 LYPD3O95274 346 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 ANP32DO95626 131 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 THY1P04216 161 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 DBHP09172 617 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 ALDOCP09972 364 aaKnown RBP11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 LBPP18428 481 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 MSR1P21757 451 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 AQP2P41181 271 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 CD200P41217 278 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 RGS6P49758 472 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 ACSM1Q08AH1 577 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 RGNQ15493 299 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 TMEM95Q3KNT9 176 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 TTC33Q6PID6 262 aaPredicted RBP11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 Q6ZS46 218 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 SYT9Q86SS6 491 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 CELF2-AS1Q8N7Q2 184 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 NFKBIDQ8NI38 313 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 PIFOQ8TCI5 191 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 ZNF583Q96ND8 569 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 MCHR1Q99705 422 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 MEGF9Q9H1U4 602 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 MUC13Q9H3R2 512 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 HERC2O95714 4834 aa11.07□□□□□ -0.64
EXOSC3-207ENST00000490516 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 CPSF4LA6NMK7 179 aaKnown RBP11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 ITM2AO43736 263 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 SHBGP04278 402 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 ZCCHC18P0CG32 403 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 GUCA1AP43080 201 aaPredicted RBP11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 ZNF613Q6PF04 617 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 ZNF781Q8N8C0 355 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 PCYOX1LQ8NBM8 494 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 MOSPD2Q8NHP6 518 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 TFAP2CQ92754 450 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 RASD2Q96D21 266 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 GPR61Q9BZJ8 451 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 TRIM36Q9NQ86 728 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 KAAG1Q9UBP8 84 aa11.06□□□□□ -0.64
EXOSC3-207ENST00000490516 GMNCA6NCL1 334 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 H0YHG0 523 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 M0R3H8 397 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 IFNW1P05000 195 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 BGNP21810 368 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 CASQ1P31415 396 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 DGCR2P98153 550 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 ARSJQ5FYB0 599 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 BEND6Q5SZJ8 279 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 OTPQ5XKR4 325 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 LIAT1Q6ZQX7 453 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 KRT77Q7Z794 578 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 OR5L1Q8NGL2 311 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 RBMXL1Q96E39 390 aaKnown RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 APOPT1Q96IL0 206 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 CCL13Q99616 98 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 RAD21L1Q9H4I0 556 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 MEPEQ9NQ76 525 aaPredicted RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 POLE4Q9NR33 117 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 AIG1Q9NVV5 245 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 STX18Q9P2W9 335 aaKnown RBP11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 SLC7A7Q9UM01 511 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms