RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DCAF16Q9NXF7 216 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 MTFP1Q9UDX5 166 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 NSD2O96028 1365 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 DENND4AQ7Z401 1863 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 GAKO14976 1311 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 TRAV19A0A0A6YYK7 116 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 KBTBD11-OT1A0A1B0GTJ5 212 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 NVLO15381 856 aaKnown RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 REM1O75628 298 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 CCNB2O95067 398 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 LSM8O95777 96 aaKnown RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 ERCC1P07992 297 aaPredicted RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 OR8U9P0C7N5 309 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 HMOX2P30519 316 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 CXCL12P48061 93 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 RPS23P62266 143 aaKnown RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 CCNA1P78396 465 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 MPV17L2Q567V2 206 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 TPTE2P1Q5T6R2 138 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 C1orf185Q5T7R7 199 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 TWF2Q6IBS0 349 aaKnown RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 ZFP1Q6P2D0 407 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 TMEM220Q6QAJ8 160 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 C12orf54Q6X4T0 127 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 SLC16A13Q7RTY0 426 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 NEGR1Q7Z3B1 354 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 CNPY4Q8N129 248 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 NECAP1Q8NC96 275 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 CCDC148Q8NFR7 591 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 OR6Q1Q8NGQ2 317 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 OR6N1Q8NGY5 312 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 LILRB4Q8NHJ6 448 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 OR51E1Q8TCB6 317 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 ZNF488Q96MN9 340 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 DOK1Q99704 481 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 RNF5Q99942 180 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 C11orf70Q9BRQ4 267 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 ZNF2Q9BSG1 426 aaPredicted RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 TMEM38AQ9H6F2 299 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 VPS37BQ9H9H4 285 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 AGPAT4Q9NRZ5 378 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 C20orf96Q9NUD7 363 aaPredicted RBP2.19□□□□□ -2.06
CD46-216ENST00000490278 CLN8Q9UBY8 286 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 PALLDQ8WX93 1383 aa2.19□□□□□ -2.06
CD46-216ENST00000490278 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
CD46-216ENST00000490278 A6NDN8 102 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 H0YJW9 148 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 RRP8O43159 456 aaKnown RBP2.18□□□□□ -2.06
CD46-216ENST00000490278 HMMRO75330 724 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 SLC22A5O76082 557 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 CD160O95971 181 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 CCNE2O96020 404 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 HBE1P02100 147 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 ZNF806P0C7X5 589 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 IL32P24001 234 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 RBM34P42696 430 aaKnown RBP2.18□□□□□ -2.06
CD46-216ENST00000490278 KIR3DL2P43630 455 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 RAB9AP51151 201 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 CRADDP78560 199 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 PITPNAQ00169 270 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 ZNF816Q0VGE8 651 aaPredicted RBP2.18□□□□□ -2.06
CD46-216ENST00000490278 CDC20Q12834 499 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 ART3Q13508 389 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 DGCR6Q14129 220 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 PRSS8Q16651 343 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 AP1ARQ63HQ0 302 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 ADNP2Q6IQ32 1131 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 CBLN2Q8IUK8 224 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 NKAIN4Q8IVV8 208 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 SNX31Q8N9S9 440 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 LINC01560Q8TB33 94 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 UCK2Q9BZX2 261 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 EXO5Q9H790 373 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 BEX1Q9HBH7 125 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 SLC38A10Q9HBR0 1119 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 CCNB1IP1Q9NPC3 277 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 MED4Q9NPJ6 270 aa2.18□□□□□ -2.06
CD46-216ENST00000490278 IGLV3-12A0A075B6K2 115 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 TRAV6A0A075B6T7 132 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 IGKV1-8A0A0C4DH67 115 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 ZNF850A8MQ14 1090 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 SYCE1LA8MT33 242 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 H7C1H1 209 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 SLC9A3R1O14745 358 aaPredicted RBP2.17□□□□□ -2.06
CD46-216ENST00000490278 CHST10O43529 356 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 HPRT1P00492 218 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 ZNF688P0C7X2 276 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 CSNK2A2P19784 350 aaPredicted RBP2.17□□□□□ -2.06
CD46-216ENST00000490278 TNFSF9P41273 254 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 ZNF121P58317 390 aaPredicted RBP2.17□□□□□ -2.06
CD46-216ENST00000490278 CDK5Q00535 292 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 PIGHQ14442 188 aaPredicted RBP2.17□□□□□ -2.06
CD46-216ENST00000490278 ZNF266Q14584 549 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 TMEM53Q6P2H8 277 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 SLC25A34Q6PIV7 304 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 JAGN1Q8N5M9 183 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 PQLC3Q8N755 202 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 CIRBP-AS1Q8TBR5 109 aa2.17□□□□□ -2.06
CD46-216ENST00000490278 NRBF2Q96F24 287 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms