RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	SMIM31	A0A1B0GVY4	71 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101		E9PI62	339 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	PSMD9	O00233	223 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	MSTN	O14793	375 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	RER1	O15258	196 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	OGG1	O15527	345 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	ATE1	O95260	518 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	WNT11	O96014	354 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	DCTD	P32321	178 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	TGFBR2	P37173	567 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	TGM4	P49221	684 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	RGS6	P49758	472 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	RIDA	P52758	137 aa	Known RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	SCRN3	Q0VDG4	424 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	GPR50	Q13585	617 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	P2RY6	Q15077	328 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	TST	Q16762	297 aa	Known RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	CCDC58	Q4VC31	144 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	LIPN	Q5VXI9	398 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	ZNF433	Q8N7K0	673 aa	Predicted RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	C1orf162	Q8NEQ5	155 aa	Predicted RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	RNF166	Q96A37	237 aa	Predicted RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	PNRC2	Q9NPJ4	139 aa	Known RBP	15.82	■□□□□ 0.12
SRM-206	ENST00000490101	ACOXL	Q9NUZ1	547 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	TIMM10B	Q9Y5J6	103 aa		15.82	■□□□□ 0.12
SRM-206	ENST00000490101	ZNF878	C9JN71	531 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	CCRL2	O00421	344 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	MMP7	P09237	267 aa	Predicted RBP	15.81	■□□□□ 0.12
SRM-206	ENST00000490101	H2BFM	P0C1H6	154 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	HOXB1	P14653	301 aa	Predicted RBP	15.81	■□□□□ 0.12
SRM-206	ENST00000490101	SSX1	Q16384	188 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	DEFB113	Q30KQ7	82 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	CCDC92	Q53HC0	331 aa	Predicted RBP	15.81	■□□□□ 0.12
SRM-206	ENST00000490101	FDX2	Q6P4F2	183 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	PHC2	Q8IXK0	858 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	CCDC36	Q8IYA8	594 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	FGFBP3	Q8TAT2	258 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	RPS4Y2	Q8TD47	263 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	UFD1	Q92890	307 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	MBD6	Q96DN6	1003 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	GSX1	Q9H4S2	264 aa	Predicted RBP	15.81	■□□□□ 0.12
SRM-206	ENST00000490101	NIPAL2	Q9H841	368 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	PLEKHF2	Q9H8W4	249 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	CENPM	Q9NSP4	180 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	DDX28	Q9NUL7	540 aa	Known RBP	15.81	■□□□□ 0.12
SRM-206	ENST00000490101	ZNF224	Q9NZL3	707 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101	LRP12	Q9Y561	859 aa		15.81	■□□□□ 0.12
SRM-206	ENST00000490101		H3BSA7	217 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	CD1A	P06126	327 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	CD36	P16671	472 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	ZNF32	P17041	273 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	CD53	P19397	219 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	GTF2A1	P52655	376 aa	Predicted RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	RAB35	Q15286	201 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	GABRA6	Q16445	453 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	SLC36A2	Q495M3	483 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	ELFN2	Q5R3F8	820 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	DMKN	Q6E0U4	476 aa	Predicted RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	RPL22L1	Q6P5R6	122 aa	Known RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	SPATC1	Q76KD6	591 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	OR2H1	Q9GZK4	316 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	HDHD2	Q9H0R4	259 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101	RBM38	Q9H0Z9	239 aa	Known RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	SIRT4	Q9Y6E7	314 aa	Predicted RBP	15.8	■□□□□ 0.12
SRM-206	ENST00000490101	CEPT1	Q9Y6K0	416 aa		15.8	■□□□□ 0.12
SRM-206	ENST00000490101		A0A096LPE4	126 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101		A0A1W2PPZ6	126 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	CIB4	A0PJX0	185 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101		A8MXE2	369 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	CASK	O14936	926 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	SGCE	O43556	437 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	PLPP2	O43688	288 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	CEL	P19835	753 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	ARR3	P36575	388 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	PSMB10	P40306	273 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	GRB2	P62993	217 aa	Known RBP	15.79	■□□□□ 0.12
SRM-206	ENST00000490101	PSG4	Q00888	419 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	ECH1	Q13011	328 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	CDK5R1	Q15078	307 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	TBRG1	Q3YBR2	411 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	GPR107	Q5VW38	600 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	LIPK	Q5VXJ0	399 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	OR7E24	Q6IFN5	339 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	ZNF474	Q6S9Z5	364 aa	Predicted RBP	15.79	■□□□□ 0.12
SRM-206	ENST00000490101	ANKRD13B	Q86YJ7	626 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	WFDC11	Q8NEX6	87 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	DACH2	Q96NX9	599 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	FUNDC2	Q9BWH2	189 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	FAM192A	Q9GZU8	254 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	WNT5B	Q9H1J7	359 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	NDUFB11	Q9NX14	153 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	B3GNT2	Q9NY97	397 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	ATPIF1	Q9UII2	106 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101	GRIP1	Q9Y3R0	1128 aa		15.79	■□□□□ 0.12
SRM-206	ENST00000490101		A0A1W2PPR1	153 aa		15.78	■□□□□ 0.12
SRM-206	ENST00000490101	OR6C6	A6NF89	314 aa		15.78	■□□□□ 0.12
SRM-206	ENST00000490101	SRSF10	O75494	262 aa	Known RBP	15.78	■□□□□ 0.12
SRM-206	ENST00000490101	LYZL6	O75951	148 aa		15.78	■□□□□ 0.12
SRM-206	ENST00000490101	RPP14	O95059	124 aa	Known RBP	15.78	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms