RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 PPP1R1CQ8WVI7 109 aa11.79□□□□□ -0.52
TNXB-206ENST00000490077 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
TNXB-206ENST00000490077 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
TNXB-206ENST00000490077 ETV7Q9Y603 341 aa11.79□□□□□ -0.52
TNXB-206ENST00000490077 OR5H14A6NHG9 310 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 A8MVM7 634 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 ZNF736B4DX44 427 aaPredicted RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 PRAF2O60831 178 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 IL5P05113 134 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 DCNP07585 359 aaKnown RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 PGCP20142 388 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 BLKP51451 505 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 HSD11B2P80365 405 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 COMMD2Q86X83 199 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 ZNF441Q8N8Z8 693 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 MARCH1Q8TCQ1 289 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 ASB10Q8WXI3 467 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 LRFN5Q96NI6 719 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 RNF222A6NCQ9 220 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 NAP1L6A6NFF2 107 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 B8ZZF3 427 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 LDLRAD4O15165 306 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 OR2J2O76002 312 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 HTR3BO95264 441 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 NPY4RP50391 375 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 POLR2HP52434 150 aaKnown RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 EPHA4P54764 986 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 DHODHQ02127 395 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 TLE3Q04726 772 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 POC1BQ8TC44 478 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 ZNF501Q96CX3 271 aaPredicted RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 EVA1AQ9H8M9 152 aa11.78□□□□□ -0.52
TNXB-206ENST00000490077 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
TNXB-206ENST00000490077 UBE2QL1A1L167 161 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 MSGN1A6NI15 193 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 LMO7DNF2Z398 122 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 RP2O75695 350 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 AHSA1O95433 338 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
TNXB-206ENST00000490077 PNLIPP16233 465 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 HSF1Q00613 529 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 GLO1Q04760 184 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 PDCD1Q15116 288 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
TNXB-206ENST00000490077 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 ZNF440Q8IYI8 595 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 BEST3Q8N1M1 668 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 PHYHIPQ92561 330 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 LHFPL6Q9Y693 200 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 SNRPGP15A8MWD9 76 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 PIAS2O75928 621 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 F10P00742 488 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 DBHP09172 617 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
TNXB-206ENST00000490077 ROM1Q03395 351 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 MYBPHQ13203 477 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 COL19A1Q14993 1142 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 SLC9A3R2Q15599 337 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 SLC29A4Q7RTT9 530 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 GKN2Q86XP6 184 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 ANGPTL5Q86XS5 388 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 SLAMF6Q96DU3 332 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 R4GMQ9 66 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 DNAJC13O75165 2243 aa11.77□□□□□ -0.53
TNXB-206ENST00000490077 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 TRBV11-1A0A0K0K1C0 115 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 NPIPA5E9PKD4 350 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 ATP6V1G2-DDX39BF2Z307 99 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 H3BUI4 141 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 CSF1P09603 554 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 PATE4P0C8F1 98 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 ZNF823P16415 610 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 ID4P47928 161 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 TMEM50BP56557 158 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 PAPD4Q6PIY7 484 aaKnown RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 HDHD3Q9BSH5 251 aaPredicted RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 C8orf33Q9H7E9 229 aaPredicted RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 FAM206AQ9NX38 181 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 NPIPA1Q9UND3 350 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 A0A1B0GTI1 187 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 H0YIZ8 118 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 CYB5AP00167 134 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 CD27P26842 260 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
TNXB-206ENST00000490077 GUSBP11Q6P575 273 aa11.76□□□□□ -0.53
TNXB-206ENST00000490077 GRINAQ7Z429 371 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms