RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PDCD1LG2Q9BQ51 273 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 COMMD4Q9H0A8 199 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 PIGMQ9H3S5 423 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 EXOSC4Q9NPD3 245 aaKnown RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF629Q9UEG4 869 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 NUFIP1Q9UHK0 495 aaKnown RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 OR52A1Q9UKL2 312 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 GSTK1Q9Y2Q3 226 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 A0A096LPE4 126 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 A0A0G2JNJ9 132 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 A0A1W2PPW3 197 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 MSTNO14793 375 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 ISG15P05161 165 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 CASP6P55212 293 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 TUBA1BP68363 451 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 PMPCAQ10713 525 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 GABRA6Q16445 453 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 TBRG1Q3YBR2 411 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 SOWAHCQ53LP3 525 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF704Q6ZNC4 412 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-205ENST00000489656 TUBA1AQ71U36 451 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 ELMOD2Q8IZ81 293 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 C17orf78Q8N4C9 275 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 RGP1Q92546 391 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-205ENST00000489656 SPTSSAQ969W0 71 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 KCTD7Q96MP8 289 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 CNTNAP3BQ96NU0 1288 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 HDHD5Q9BXW7 423 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 CNTNAP3Q9BZ76 1288 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 OPN3Q9H1Y3 402 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-205ENST00000489656 HEATR1Q9H583 2144 aaKnown RBP12.36□□□□□ -0.43
VPS26A-205ENST00000489656 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 Q9UFV3 132 aa12.36□□□□□ -0.43
VPS26A-205ENST00000489656 TRBV5-5A0A0J9YX44 114 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 UBCP0CG48 685 aaKnown RBP12.35□□□□□ -0.43
VPS26A-205ENST00000489656 ACHEP22303 614 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 PCSK6P29122 969 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 CX3CR1P49238 355 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
VPS26A-205ENST00000489656 ACSM3Q53FZ2 586 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 PABPC1L2AQ5JQF8 200 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 C1QTNF12Q5T7M4 302 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 BCL2L15Q5TBC7 163 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 DRAM2Q6UX65 266 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF676Q8N7Q3 588 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 NDNFQ8TB73 568 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
VPS26A-205ENST00000489656 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
VPS26A-205ENST00000489656 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 DCSTAMPQ9H295 470 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 RNF167Q9H6Y7 350 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 RNF121Q9H920 327 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 OBP2BQ9NPH6 170 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 SLC22A13Q9Y226 551 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 ESPL1Q14674 2120 aa12.35□□□□□ -0.43
VPS26A-205ENST00000489656 CIB4A0PJX0 185 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF503-AS2A6NEH8 195 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 M0R135 149 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
VPS26A-205ENST00000489656 LYZL6O75951 148 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 HLA-HP01893 362 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 TTRP02766 147 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 TGFBR1P36897 503 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 HTR5AP47898 357 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 PRKXP51817 358 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 TPTEP56180 551 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 RAB1AP62820 205 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 Q499Y3 187 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 SFRP5Q5T4F7 317 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM244Q5VVB8 128 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 C22orf42Q6IC83 251 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 MRGPRGQ86SM5 289 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF283Q8N7M2 679 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 AKR7LQ8NHP1 331 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 GPR148Q8TDV2 347 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 DACH2Q96NX9 599 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 SP140LQ9H930 580 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 MEMO1Q9Y316 297 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
VPS26A-205ENST00000489656 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
VPS26A-205ENST00000489656 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
VPS26A-205ENST00000489656 A8MXE2 369 aa12.33□□□□□ -0.44
VPS26A-205ENST00000489656 ZNF879B4DU55 563 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms