RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NAA40Q86UY6 237 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 KRTAP1-3Q8IUG1 177 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 SYNPRQ8TBG9 265 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 RNF133Q8WVZ7 376 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 GTF3AQ92664 365 aaKnown RBP12.36□□□□□ -0.43
HLA-F-229ENST00000489502 MARS2Q96GW9 593 aaKnown RBP12.36□□□□□ -0.43
HLA-F-229ENST00000489502 SORCS2Q96PQ0 1159 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 DCLRE1CQ96SD1 692 aaKnown RBP12.36□□□□□ -0.43
HLA-F-229ENST00000489502 FOXC2Q99958 501 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 GSX2Q9BZM3 304 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 YIPF3Q9GZM5 350 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF701Q9NV72 531 aaPredicted RBP12.36□□□□□ -0.43
HLA-F-229ENST00000489502 TBCCD1Q9NVR7 557 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 LAMP5Q9UJQ1 280 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
HLA-F-229ENST00000489502 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 VSTM5A8MXK1 200 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 H7C417 338 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 M0R233 179 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 PSMD9O00233 223 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF250P15622 560 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 GABRB1P18505 474 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 HSD11B1P28845 292 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 OTX1P32242 354 aaPredicted RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 OPRL1P41146 370 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 CX3CR1P49238 355 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 NUDT6P53370 316 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 TPTEP56180 551 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 NKPD1Q17RQ9 610 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 Q5PR19 223 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 ZCCHC24Q8N2G6 241 aaKnown RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 KLF14Q8TD94 323 aaPredicted RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 TRUB1Q8WWH5 349 aaKnown RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 SPTSSAQ969W0 71 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 TBX5Q99593 518 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 DOK1Q99704 481 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 KCNJ15Q99712 375 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 VRK1Q99986 396 aaPredicted RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 ADI1Q9BV57 179 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 VCXQ9H320 206 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 TPK1Q9H3S4 243 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 TAAR3PQ9P1P4 343 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 WARS2Q9UGM6 360 aaKnown RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
HLA-F-229ENST00000489502 FLNAP21333 2647 aaKnown RBP12.35□□□□□ -0.43
HLA-F-229ENST00000489502 LY6HO94772 140 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 ATP6V1G2O95670 118 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 LCATP04180 440 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 ADRA2AP08913 450 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 H2BFMP0C1H6 154 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 SBK2P0C263 348 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 ALOX5APP20292 161 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 GCH1P30793 250 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 RGS6P49758 472 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 PPOXP50336 477 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 AQP4P55087 323 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 GRB2P62993 217 aaKnown RBP12.34□□□□□ -0.43
HLA-F-229ENST00000489502 IL5RAQ01344 420 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF91Q05481 1191 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-229ENST00000489502 ZNF718Q3SXZ3 478 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 DHRSXQ8N5I4 330 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 RFKQ969G6 155 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-229ENST00000489502 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 CXXC4Q9H2H0 198 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 HAO2Q9NYQ3 351 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
HLA-F-229ENST00000489502 LRP12Q9Y561 859 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 PMF1-BGLAPU3KQ54 211 aa12.34□□□□□ -0.43
HLA-F-229ENST00000489502 H3BSA7 217 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 J3QW42 95 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 ANXA2P07355 339 aaKnown RBP12.33□□□□□ -0.44
HLA-F-229ENST00000489502 GNAO1P09471 354 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 NAT2P11245 290 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 BMP4P12644 408 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 PAX1P15863 534 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 SLC15A1P46059 708 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 SELENOVP59797 346 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 CXCR4P61073 352 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 ADARB1P78563 741 aaKnown RBP12.33□□□□□ -0.44
HLA-F-229ENST00000489502 POU4F2Q12837 409 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 TESK1Q15569 626 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 OCLNQ16625 522 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 ZNF691Q5VV52 312 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
HLA-F-229ENST00000489502 DRAM2Q6UX65 266 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 COLCA1Q6ZS62 124 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
HLA-F-229ENST00000489502 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms