RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 WDR25Q64LD2 544 aaPredicted RBP8.67□□□□□ -1.02
CHKB-211ENST00000489453 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 GPR139Q6DWJ6 353 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 DNM1P34Q6PK57 102 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 FKBP9P1Q75LS8 142 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 ADCK1Q86TW2 530 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 FITM2Q8N6M3 262 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 GJC3Q8NFK1 279 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
CHKB-211ENST00000489453 COQ7Q99807 217 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 TMEM120AQ9BXJ8 343 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 HDHD2Q9H0R4 259 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 SYT4Q9H2B2 425 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 MMP27Q9H306 513 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 KRCC1Q9NPI7 259 aaPredicted RBP8.67□□□□□ -1.02
CHKB-211ENST00000489453 AP3M1Q9Y2T2 418 aa8.67□□□□□ -1.02
CHKB-211ENST00000489453 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 CLPSL1A2RUU4 121 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 IQCF6A8MYZ5 107 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 HMGB1P1B2RPK0 211 aaPredicted RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 FXYD1O00168 92 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 P2RY10O00398 339 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 SOCS2O14508 198 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 MLNRO43193 412 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 NDUFB2O95178 105 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 NDUFA7O95182 113 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 TROVE2P10155 538 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHKB-211ENST00000489453 SDHAP31040 664 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 NPY4RP50391 375 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 SRSF4Q08170 494 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 OCLNQ16625 522 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 IFI44LQ53G44 452 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 Q6YL49 198 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 FAM122BQ7Z309 247 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 VTCN1Q7Z7D3 282 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 BOLLQ8N9W6 283 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 FAM156AQ8NDB6 213 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 TBC1D15Q8TC07 691 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 SPRYD4Q8WW59 207 aaPredicted RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 SSMEM1Q8WWF3 244 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 GATAD2BQ8WXI9 593 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 ERGIC1Q969X5 290 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 FAM46AQ96IP4 442 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 CDADC1Q9BWV3 514 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 CHIAQ9BZP6 476 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 WDR76Q9H967 626 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 NMNAT1Q9HAN9 279 aaPredicted RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 PDP1Q9P0J1 537 aaPredicted RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 ERVK-18Q9QC07 812 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 RPS6KA6Q9UK32 745 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 AURKCQ9UQB9 309 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 NOP16Q9Y3C1 178 aaKnown RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 POMT1Q9Y6A1 747 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 TET2Q6N021 2002 aaPredicted RBP8.66□□□□□ -1.02
CHKB-211ENST00000489453 VWFP04275 2813 aa8.66□□□□□ -1.02
CHKB-211ENST00000489453 NOTCH1P46531 2555 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 A0A087WUU8 490 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 ZNF879B4DU55 563 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CDC42EP2O14613 210 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 FAM20BO75063 409 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 TOX4O94842 621 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 FSTL3O95633 263 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 LCATP04180 440 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 HLA-DPB1P04440 258 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 MELTFP08582 738 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CRABP1P29762 137 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CFHR2P36980 270 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 RPS6KA3P51812 740 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 KLF10Q13118 480 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 FHL1Q13642 323 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 OR8G1Q15617 311 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 OR8B8Q15620 311 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 FGD3Q5JSP0 725 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 METTL11BQ5VVY1 283 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 PRAMEF6Q5VXH4 476 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CORO6Q6QEF8 472 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 TBPL2Q6SJ96 375 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 LYPD2Q6UXB3 125 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 ZNF620Q6ZNG0 422 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 TMPRSS11FQ6ZWK6 438 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 MRPL21Q7Z2W9 205 aaKnown RBP8.65□□□□□ -1.02
CHKB-211ENST00000489453 ARPINQ7Z6K5 226 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 PNLDC1Q8NA58 520 aaKnown RBP8.65□□□□□ -1.02
CHKB-211ENST00000489453 SCCPDHQ8NBX0 429 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 C19orf18Q8NEA5 215 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 PITX2Q99697 317 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 PKP2Q99959 881 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 CITED1Q99966 193 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 TRIM15Q9C019 465 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 NUAK2Q9H093 628 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 PRDM13Q9H4Q3 707 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 ANKRD19PQ9H560 264 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 FN3KRPQ9HA64 309 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 TRIM36Q9NQ86 728 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 UFSP2Q9NUQ7 469 aa8.65□□□□□ -1.02
CHKB-211ENST00000489453 C1RLQ9NZP8 487 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms