RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ARL5BQ96KC2 179 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 ADOQ96SZ5 270 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 NIPSNAP1Q9BPW8 284 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 COPS4Q9BT78 406 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 MCRIP2Q9BUT9 160 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 DGCR6LQ9BY27 220 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 POLR2J2Q9GZM3 115 aaKnown RBP6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 SLC38A1Q9H2H9 487 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 PPA2Q9H2U2 334 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 PIGUQ9H490 435 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 DUSP21Q9H596 190 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 TIGARQ9NQ88 270 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 PLCXD1Q9NUJ7 323 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 ACOXLQ9NUZ1 547 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 ZNF443Q9Y2A4 671 aaPredicted RBP6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 CMAHPQ9Y471 501 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 CACNG2Q9Y698 323 aa6.15□□□□□ -1.42
EXOSC3-206ENST00000489414 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 IGHV3-15A0A0B4J1V0 119 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 IRGMA1A4Y4 181 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 PRAMEF27A3QJZ7 478 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 ISPDA4D126 451 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 ZAR1LA6NP61 321 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 FFAR1O14842 300 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 SCO2O43819 266 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 TSPAN2O60636 221 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OR5F1O95221 314 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 FADS2O95864 444 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 GASTP01350 101 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 IGLV1-44P01699 117 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 CALRP27797 417 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 PSMB9P28065 219 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 EVI2BP34910 448 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 SERPINB10P48595 397 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 FUT5Q11128 374 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 PIN1Q13526 163 aaPredicted RBP6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 PTGES3Q15185 160 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 GPR68Q15743 365 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 MAPK11Q15759 364 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 DUSP5Q16690 384 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 DCST2Q5T1A1 773 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 XAF1Q6GPH4 301 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 KLHL24Q6TFL4 600 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 CD300LDQ6UXZ3 194 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF730Q6ZMV8 503 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 AHSA2Q719I0 299 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OVCH2Q7RTZ1 564 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 VRK2Q86Y07 508 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OR7G1Q8NGA0 311 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OR4K5Q8NGD3 323 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OR6T1Q8NGN1 323 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 RHOXF1Q8NHV9 184 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 TEX47Q8TBZ9 253 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 APH1AQ96BI3 265 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 GIMAP5Q96F15 307 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 MCHR1Q99705 422 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 ARHGDIGQ99819 225 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 RTN4RQ9BZR6 473 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 OBP2BQ9NPH6 170 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 RLIMQ9NVW2 624 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 MAT2BQ9NZL9 334 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 CNOT2Q9NZN8 540 aaKnown RBP6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 ERVK-18Q9QC07 812 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 A4GNTQ9UNA3 340 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 VDAC3Q9Y277 283 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 DSPPQ9NZW4 1301 aa6.14□□□□□ -1.43
EXOSC3-206ENST00000489414 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 IGHV2-70DA0A0C4DH43 119 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 A0A0U1RQK1 487 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 A0A1W2PS29 197 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 CPSF4LA6NMK7 179 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 H3BMQ9 156 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 M0R3G1 203 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC22A1O15245 554 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 TPST2O60704 377 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 CYTIPO60759 359 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 WBP4O75554 376 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 CYP7B1O75881 506 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 MT-ND2P03891 347 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 CDK1P06493 297 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 FRMD6-AS1P0C7T7 363 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 ACP2P11117 423 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 FAHP16930 419 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 S1PR1P21453 382 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 EPHA2P29317 976 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 GABRA3P34903 492 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 PSMD4P55036 377 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 SNRPGP62308 76 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 CCL8P80075 99 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 SNTB2Q13425 540 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 EFR3AQ14156 821 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 TBCEQ15813 527 aaPredicted RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 PRICKLE4Q2TBC4 344 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 TRMT12Q53H54 448 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 C9orf135Q5VTT2 229 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 MEDAGQ5VYS4 303 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 SLX4IPQ5VYV7 408 aa6.13□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF770Q6IQ21 691 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms