RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ACADSP16219 412 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 TUBG1P23258 451 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 LMO1P25800 156 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PAX6P26367 422 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 IL12AP29459 219 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 CLNS1AP54105 237 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 UFM1P61960 85 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MAB21L1Q13394 359 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DCTN2Q13561 401 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DPY19L1Q2PZI1 675 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PRAMEF6Q5VXH4 476 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 NXNQ6DKJ4 435 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 C1orf94Q6P1W5 598 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MEPCEQ7L2J0 689 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ZNF572Q7Z3I7 529 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 C4orf33Q8N1A6 199 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 BHLHE23Q8NDY6 225 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 BEND2Q8NDZ0 799 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 Q8TCH9 128 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SLC7A6Q92536 515 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MAL2Q969L2 176 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 OR5M11Q96RB7 305 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 OR52E6Q96RD3 313 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DDOQ99489 341 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 NKX3-1Q99801 234 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 CHID1Q9BWS9 393 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PCDHAC1Q9H158 963 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 TMEM27Q9HBJ8 222 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 BCL2L10Q9HD36 194 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 TUBG2Q9NRH3 451 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 UFSP2Q9NUQ7 469 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 A0A1B0GW55 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 A0A1W2PRQ8 180 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 WDR91A4D1P6 747 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MCIDASD6RGH6 385 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 HDAC3O15379 428 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ANGPTL7O43827 346 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUS4LO95620 317 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ECDO95905 644 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 GYPAP02724 150 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PF4P02776 101 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 CHRM2P08172 466 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L2P0CJ85 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L3P0CJ86 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L4P0CJ87 422 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L5P0CJ88 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L6P0CJ89 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L7P0CJ90 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 KRT4P19013 534 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SERPINB5P36952 375 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 HTR5AP47898 357 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 RAD23AP54725 363 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 UGT2B15P54855 530 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ENDOGQ14249 297 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MPPED2Q15777 294 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 GTDC1Q4AE62 458 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ARMC4Q5T2S8 1044 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4L9Q6RFH8 374 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 Q8N2B8 174 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 CLDN22Q8N7P3 220 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 Q8N7P7 452 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SDR9C7Q8NEX9 313 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SLC7A13Q8TCU3 470 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ST8SIA4Q92187 359 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 HDAC2Q92769 488 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 TNFRSF14Q92956 283 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 VPS33AQ96AX1 596 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 AJUBAQ96IF1 538 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 MAELQ96JY0 434 aaKnown RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 ZNF582Q96NG8 517 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-212ENST00000489378 NUF2Q9BZD4 464 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 WNT10AQ9GZT5 417 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 SMURF2Q9HAU4 748 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 TPT1P8Q9HAU6 139 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PALMDQ9NP74 551 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 NANSQ9NR45 359 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 PTTG3PQ9NZH4 202 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 DUX4Q9UBX2 424 aa7.44□□□□□ -1.22
SSBP1-212ENST00000489378 A0A1B0GWJ7 208 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 A0A1W2PRG6 482 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 TMEM247A6NEH6 219 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 BLOC1S5-TXNDC5H3BN57 136 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 KPNA4O00629 521 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-212ENST00000489378 RFXANKO14593 260 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ZFPL1O95159 310 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 SCG5P05408 212 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 CCDC159P0C7I6 412 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ASAH2BP0C7U1 165 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 FAHP16930 419 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 BMXP51813 675 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 RGS8P57771 180 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-212ENST00000489378 PCBD1P61457 104 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 NCALDP61601 193 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms