RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 VDAC3Q9Y277 283 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 COA3Q9Y2R0 106 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 N6AMT1Q9Y5N5 214 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1B0GVI7 797 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TMEM269A0A1B0GVZ9 245 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1W2PPK0 400 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ANKRD20A5PA0PJZ0 165 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF878C9JN71 531 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 K7ENP7 123 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SULT2B1O00204 365 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PSMD9O00233 223 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 KLK10O43240 276 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TRAF3IP2O43734 574 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PEX14O75381 377 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GLSO94925 669 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 HPP00738 406 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 APOC1P02654 83 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 CSF1P09603 554 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 H2BFMP0C1H6 154 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GABRA1P14867 456 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 LIFP15018 202 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF43P17038 809 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 RAB6AP20340 208 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 CTSSP25774 331 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GDNFP39905 211 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GATA4P43694 442 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PTH2RP49190 550 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 BIDP55957 195 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 CLRN1P58418 232 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ACTBP60709 375 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ACTG1P63261 375 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 MRPS15P82914 257 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 DGCR2P98153 550 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SRSF6Q13247 344 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TNK1Q13470 666 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 MELKQ14680 651 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SSPNQ14714 243 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 RAB11BQ15907 218 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 BCL2A1Q16548 175 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 CCDC92Q53HC0 331 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 C1orf100Q5SVJ3 147 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 HES5Q5TA89 166 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 BCL2L15Q5TBC7 163 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TMEM225Q6GV28 225 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 OR5M10Q6IEU7 315 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 RAB12Q6IQ22 244 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 JMJD6Q6NYC1 403 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 INO80CQ6PI98 192 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 C16orf47Q6ZP98 133 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TMPPEQ6ZT21 453 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 FCRLAQ7L513 359 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 DCXRQ7Z4W1 244 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 RPS19BP1Q86WX3 136 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SIAH3Q8IW03 269 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SULF2Q8IWU5 870 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ELMOD2Q8IZ81 293 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GRPEL2Q8TAA5 225 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 ITFG2Q969R8 447 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PNPLA2Q96AD5 504 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 WBP1Q96G27 269 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 HYLS1Q96M11 299 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 AMELYQ99218 206 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PIGQQ9BRB3 760 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 UQCC2Q9BRT2 126 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SF3B5Q9BWJ5 86 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 GON7Q9BXV9 100 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SLC25A18Q9H1K4 315 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 SLA2Q9H6Q3 261 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 DDX28Q9NUL7 540 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 NUDT15Q9NV35 164 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 FBLN5Q9UBX5 448 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 NUFIP1Q9UHK0 495 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 OR52A1Q9UKL2 312 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 FBXL3Q9UKT7 428 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TLN1Q9Y490 2541 aaKnown RBP7.51□□□□□ -1.21
VTI1A-207ENST00000489357 PCSK5Q92824 1860 aa7.51□□□□□ -1.21
VTI1A-207ENST00000489357 TRAV8-7A0A075B6U6 113 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 A0A1B0GUH1 482 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 GGT3PA6NGU5 568 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 ZNF726A6NNF4 738 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 C17orf51A8MQB3 221 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 C21orf140B9A014 251 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 H3BML4 177 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 H7C417 338 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 LANCL1O43813 399 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 EFNA2O43921 213 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 ATP6V1G1O75348 118 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 TGM6O95932 706 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 PNPP00491 289 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 MELTFP08582 738 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 CELA3AP09093 270 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 CD3GP09693 182 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 HLA-DOBP13765 273 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 PSMB1P20618 241 aaKnown RBP7.5□□□□□ -1.21
VTI1A-207ENST00000489357 STOMP27105 288 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 HSD11B1P28845 292 aa7.5□□□□□ -1.21
VTI1A-207ENST00000489357 GUCA1AP43080 201 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-207ENST00000489357 SOX2P48431 317 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms