RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PPP1CBP62140 327 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 YWHAEP62258 255 aaKnown RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 SLAQ13239 276 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 CAPRIN1Q14444 709 aaKnown RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 ZNF266Q14584 549 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 RGNQ15493 299 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 STK11Q15831 433 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 C6orf183Q5T699 404 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 HES5Q5TA89 166 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 C16orf87Q6PH81 154 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ARL9Q6T311 187 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 OR2W3Q7Z3T1 314 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 UNC93AQ86WB7 457 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ARHGAP18Q8N392 663 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 CBR4Q8N4T8 237 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 GATSQ8NAP1 163 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 OR51G1Q8NGK1 321 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ZNF596Q8TC21 504 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 BLOC1S5Q8TDH9 187 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 LRRC29Q8WV35 223 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 BAALCQ8WXS3 180 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 CACNG8Q8WXS5 425 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 TFGQ92734 400 aaPredicted RBP2.87□□□□□ -1.95
XRN1-213ENST00000489241 MRGPRFQ96AM1 343 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 TMIGD2Q96BF3 282 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 UQCC2Q9BRT2 126 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 AGMATQ9BSE5 352 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 TM6SF2Q9BZW4 377 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 KIR3DX1Q9H7L2 352 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 AGPAT3Q9NRZ7 376 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 UVRAGQ9P2Y5 699 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 MTFP1Q9UDX5 166 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 MAP3K15Q6ZN16 1313 aa2.87□□□□□ -1.95
XRN1-213ENST00000489241 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
XRN1-213ENST00000489241 CENPXA8MT69 81 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 FAM166BA8MTA8 275 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 ANKRD65E5RJM6 399 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 NVLO15381 856 aaKnown RBP2.86□□□□□ -1.95
XRN1-213ENST00000489241 RHOXF2BP0C7M4 288 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 TCP1P17987 556 aaKnown RBP2.86□□□□□ -1.95
XRN1-213ENST00000489241 IL32P24001 234 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 ATP5J2P56134 94 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 VSX2P58304 361 aaPredicted RBP2.86□□□□□ -1.95
XRN1-213ENST00000489241 ART3Q13508 389 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 PON2Q15165 354 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 LIN9Q5TKA1 542 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 METTL21CQ5VZV1 264 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 PRMT9Q6P2P2 845 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 DUSP18Q8NEJ0 188 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 NOXO1Q8NFA2 376 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 OR10G4Q8NGN3 311 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 FAM131CQ96AQ9 280 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 SGTBQ96EQ0 304 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 TAAR1Q96RJ0 339 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 GPR21Q99679 349 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 RHOXF2Q9BQY4 288 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 ISYNA1Q9NPH2 558 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 RPS6KB2Q9UBS0 482 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 NEU3Q9UQ49 428 aa2.86□□□□□ -1.95
XRN1-213ENST00000489241 FHOD3Q2V2M9 1422 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 IGLV11-55A0A075B6I3 123 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 IGHV3-74A0A0B4J1X5 117 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 LOC100506127A0A0U1RQW1 187 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 A0A1W2PRF3 423 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 A0A1W2PRM7 423 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 PSMD11O00231 422 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 POLR1CO15160 346 aaPredicted RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 ENTPD5O75356 428 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 CA11O75493 328 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 GABARAPO95166 117 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 PAHP00439 452 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 CD3GP09693 182 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 PRPS2P11908 318 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 RAB5AP20339 215 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 IVDP26440 423 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 CCR6P51684 374 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 RPS23P62266 143 aaKnown RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 CKAP4Q07065 602 aaKnown RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 DGCR6Q14129 220 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 TFDP2Q14188 446 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 GINS1Q14691 196 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 Q3ZCU0 254 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 CHRFAM7AQ494W8 412 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 RWDD4Q6NW29 188 aaKnown RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 SPERTQ8NA61 448 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 MDS2Q8NDY4 140 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 OR10W1Q8NGF6 305 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 OR8D1Q8WZ84 308 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 MSANTD3Q96H12 275 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 FAM210BQ96KR6 192 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 ZNF681Q96N22 645 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 SCGB3A2Q96PL1 93 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 PARP12Q9H0J9 701 aaKnown RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 SPNS1Q9H2V7 528 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 EDA2RQ9HAV5 297 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 NYAP2Q9P242 653 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 UBIAD1Q9Y5Z9 338 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms