RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 ZNF250P15622 560 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 CD53P19397 219 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 GCH1P30793 250 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ISL1P61371 349 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 PPP1CBP62140 327 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ACTC1P68032 377 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ACTA1P68133 377 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 EGR3Q06889 387 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 RSPO1Q2MKA7 263 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ZNF718Q3SXZ3 478 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 RFPL4BQ6ZWI9 263 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 SYNPRQ8TBG9 265 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 MBD6Q96DN6 1003 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 RASSF4Q9H2L5 321 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 OR51B6Q9H340 312 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 BEX4Q9NWD9 120 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-224ENST00000488927 GPR160Q9UJ42 338 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 PMF1-BGLAPU3KQ54 211 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ITPR2Q14571 2701 aa13.74□□□□□ -0.21
HDAC7-224ENST00000488927 ROS1P08922 2347 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 RAI1Q7Z5J4 1906 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-224ENST00000488927 CLIC3O95833 236 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 NGFP01138 241 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 SLC6A9P48067 706 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-224ENST00000488927 ROM1Q03395 351 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 RAB40BQ12829 278 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 MALLQ13021 153 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 SWI5Q1ZZU3 235 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 MBNL2Q5VZF2 373 aaKnown RBP13.73□□□□□ -0.21
HDAC7-224ENST00000488927 IZUMO2Q6UXV1 221 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 USP51Q70EK9 711 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 SPATC1Q76KD6 591 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 THAP5Q7Z6K1 395 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 OR10H4Q8NGA5 316 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 IGFBPL1Q8WX77 278 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 MARS2Q96GW9 593 aaKnown RBP13.73□□□□□ -0.21
HDAC7-224ENST00000488927 DOK1Q99704 481 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
HDAC7-224ENST00000488927 IRGMA1A4Y4 181 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 WBP4O75554 376 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 FADS2O95864 444 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 CD8AP01732 235 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 LCATP04180 440 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 DBTP11182 482 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 DCTDP32321 178 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 CX3CR1P49238 355 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 HCCSP53701 268 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 CXCR4P61073 352 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 ZNF91Q05481 1191 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 C11orf71Q6IPW1 123 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 ZNF322Q6U7Q0 402 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 ZNF283Q8N7M2 679 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 OR52H1Q8NGJ2 320 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 MRPL48Q96GC5 212 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 OR8B4Q96RC9 309 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 AMELYQ99218 206 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 MRPL37Q9BZE1 423 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 COPS3Q9UNS2 423 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 EXOGQ9Y2C4 368 aaKnown RBP13.72□□□□□ -0.21
HDAC7-224ENST00000488927 KLHDC2Q9Y2U9 406 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 CACNA1DQ01668 2161 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 PLCE1Q9P212 2302 aa13.72□□□□□ -0.21
HDAC7-224ENST00000488927 IGLV3-9A0A075B6K5 115 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 ACOD1A6NK06 481 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 OVOL3O00110 214 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 IGHV3-13P01766 116 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 MT-ND5P03915 603 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 GNAO1P09471 354 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 PAX1P15863 534 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 PPOXP50336 477 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 PRKXP51817 358 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 RIDAP52758 137 aaKnown RBP13.71□□□□□ -0.21
HDAC7-224ENST00000488927 MST1LQ2TV78 715 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 DEFB113Q30KQ7 82 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 C6orf52Q5T4I8 152 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 LRRN1Q6UXK5 716 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 CNIH3Q8TBE1 160 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 KLF14Q8TD94 323 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-224ENST00000488927 OPA3Q9H6K4 179 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 INPP5EQ9NRR6 644 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 AASSQ9UDR5 926 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 CGGBP1Q9UFW8 167 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-224ENST00000488927 IKZF2Q9UKS7 526 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
HDAC7-224ENST00000488927 LRP12Q9Y561 859 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms