RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PTPN23Q9H3S7 1636 aa2.5□□□□□ -2.01
SSR1-209ENST00000488834 KIAA0232Q92628 1395 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ABCC12Q96J65 1359 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 KIF13AQ9H1H9 1805 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NEURL4Q96JN8 1562 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MROH7-TTC4A0A0A0MT08 1334 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ASTN1O14525 1302 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PCDH11XQ9BZA7 1347 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CDK13Q14004 1512 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 EHBP1L1Q8N3D4 1523 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 UGGT2Q9NYU1 1516 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CHD1O14646 1710 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CDC42BPBQ9Y5S2 1711 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DICER1Q9UPY3 1922 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 A0A0G2JRQ6 117 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RAB19A4D1S5 217 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NKX2-6A6NCS4 301 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 A6NIZ1 184 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ATP6V1G2-DDX39BF2Z307 99 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 hCG_2039718K7EN88 272 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DCTN6O00399 190 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 SIVA1O15304 175 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CLOCKO15516 846 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MBTPS2O43462 519 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RAMP3O60896 148 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 SLC25A27O95847 323 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 KRT16P08779 473 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 OCM2P0CE71 109 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 OCMP0CE72 109 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 UBCP0CG48 685 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 ABOP16442 354 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 HOXB8P17481 243 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 RCC1P18754 421 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 RCVRNP35243 200 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MAP3K8P41279 467 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 SLC1A2P43004 574 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GLP1RP43220 463 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 HCAR3P49019 387 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DUSP3P51452 185 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 KPNA2P52292 529 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 PSMD4P55036 377 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 ATP5J2P56134 94 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 TAS2R19P59542 299 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GPX6P59796 221 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RAB14P61106 215 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RAP1BP61224 184 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NAA20P61599 178 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 TSPAN5P62079 268 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PSMC5P62195 406 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 KCNJ2P63252 427 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CDK16Q00536 496 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 TGFBR3Q03167 851 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 SIGLEC14Q08ET2 396 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DMC1Q14565 340 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GPNMBQ14956 572 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 SLC15A2Q16348 729 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NRF1Q16656 503 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DUSP7Q16829 419 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PARP15Q460N3 678 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DMRTC1Q5HYR2 192 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MARCH8Q5T0T0 291 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RESP18Q5W5W9 173 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DUPD1Q68J44 220 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PTRHD1Q6GMV3 140 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 C11orf71Q6IPW1 123 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RWDD4Q6NW29 188 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 TMIGD1Q6UXZ0 262 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NELFCDQ8IXH7 590 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 LRRC34Q8IZ02 419 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 RIBC1Q8N443 379 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 MMGT1Q8N4V1 131 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GATSQ8NAP1 163 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MDS2Q8NDY4 140 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 OR4D6Q8NGJ1 314 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NELFBQ8WX92 580 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 BORCS5Q969J3 196 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CXorf40BQ96DE9 158 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PAGE5Q96GU1 130 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ZNF641Q96N77 438 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 TBX15Q96SF7 602 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 C6orf62Q9GZU0 229 aaPredicted RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 OR52A5Q9H2C5 316 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ANKRD19PQ9H560 264 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CSNK1G1Q9HCP0 422 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 MRPL40Q9NQ50 206 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 ZNF302Q9NR11 478 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 INPP5EQ9NRR6 644 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 GNPTGQ9UJJ9 305 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ZNF229Q9UJW7 825 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 DNAJC12Q9UKB3 198 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 NUP50Q9UKX7 468 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 FLVCR2Q9UPI3 526 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PEX16Q9Y5Y5 336 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PLA2R1Q13018 1463 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CCDC141Q6ZP82 1450 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 CROCC2H7BZ55 1655 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 PPRC1Q5VV67 1664 aaKnown RBP2.49□□□□□ -2.01
SSR1-209ENST00000488834 FAM135BQ49AJ0 1406 aa2.49□□□□□ -2.01
SSR1-209ENST00000488834 ABCC3O15438 1527 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms