RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ACOT4Q8N9L9 421 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 NPRL2Q8WTW4 380 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 ZNF689Q96CS4 500 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 LRFN5Q96NI6 719 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 VSX1Q9NZR4 365 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 SLCO1B1Q9Y6L6 691 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 PLXNA3P51805 1871 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 CHD3Q12873 2000 aaKnown RBP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 CDC40O60508 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 MBPP02686 304 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 IFNA6P05013 189 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 F13BP05160 661 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 ERVFRD-1P60508 538 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 CLEC12BQ2HXU8 276 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 GGNBP1Q5YKI7 109 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-229ENST00000488765 WDR76Q9H967 626 aa14.55□□□□□ -0.08
MCF2L-229ENST00000488765 GPRIN2O60269 458 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 DNAJB6O75190 326 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 CD200P41217 278 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 FRKP42685 505 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 ZNHIT3Q15649 155 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 TIPARPQ7Z3E1 657 aaKnown RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 OR10J5Q8NHC4 309 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 BADQ92934 168 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 AMELYQ99218 206 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 ALG12Q9BV10 488 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 NELFAQ9H3P2 528 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 RXFP3Q9NSD7 469 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 HSF4Q9ULV5 492 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 ETV7Q9Y603 341 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 SEC14L6B5MCN3 397 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 EFSO43281 561 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 TAGLN2P37802 199 aaKnown RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 PRLHRP49683 370 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 TMEM215Q68D42 235 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 LANCL3Q6ZV70 420 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 TRAPPC6BQ86SZ2 158 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 HIST3H2BBQ8N257 126 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 OR1J1Q8NGS3 322 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 OR2I1PQ8NGU4 316 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 FAM83CQ9BQN1 747 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 DENND4CQ5VZ89 1909 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 ZNF860A6NHJ4 632 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 ELFN1P0C7U0 828 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 PAX6P26367 422 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 SLC6A6P31641 620 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 PPICP45877 212 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 DIO1P49895 249 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 DMRTA1Q5VZB9 504 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 SLC25A42Q86VD7 318 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 THNSL2Q86YJ6 484 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 KLHDC8AQ8IYD2 350 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 SCARF2Q96GP6 870 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 IGFLR1Q9H665 355 aa14.54□□□□□ -0.08
MCF2L-229ENST00000488765 MTHFD2LQ9H903 347 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 MRPS18BQ9Y676 258 aaKnown RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 COL4A4P53420 1690 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-229ENST00000488765 FRMPD3Q5JV73 1810 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 SMCO3A2RU48 225 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 TRGC1P0CF51 173 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 NHLH2Q02577 135 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 PLAURQ03405 335 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 TRA2AQ13595 282 aaKnown RBP eCLIP14.53□□□□□ -0.08
MCF2L-229ENST00000488765 NNATQ16517 81 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 FJX1Q86VR8 437 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 HSD17B11Q8NBQ5 300 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 C15orf40Q8WUR7 153 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 DTD2Q96FN9 168 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 SLC41A2Q96JW4 573 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 PPP1R14DQ9NXH3 145 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 RAB22AQ9UL26 194 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 H0YL77 283 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 IFNA10P01566 189 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 HLA-DQA2P01906 255 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 GNB3P16520 340 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 CAMLGP49069 296 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 PMPCAQ10713 525 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 UBE2V2Q15819 145 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 MESTQ5EB52 335 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 LPCAT3Q6P1A2 487 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 OR2L5Q8NG80 312 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 OR56A1Q8NGH5 318 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 FIBINQ8TAL6 211 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 FRZBQ92765 325 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 SNHG12Q9BXW3 62 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 ZDHHC5Q9C0B5 715 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 LSM5Q9Y4Y9 91 aaKnown RBP14.53□□□□□ -0.08
MCF2L-229ENST00000488765 A8MWP6 167 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 PGA3P0DJD8 388 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 GDI1P31150 447 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-229ENST00000488765 ALG10BQ5I7T1 473 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 ETFRF1Q6IPR1 90 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 Q6ZNB5 142 aa14.53□□□□□ -0.08
MCF2L-229ENST00000488765 MDGA2Q7Z553 956 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms