RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 SDHAF2Q9NX18 166 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 SEMA5BQ9P283 1151 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 PMP2P02689 132 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TTRP02766 147 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 FSTP19883 344 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF248Q8NDW4 579 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 NFAM1Q8NET5 270 aaPredicted RBP11.28□□□□□ -0.6
CLIC4-202ENST00000488683 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF75AQ96N20 296 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TMPRSS13Q9BYE2 586 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 SLC17A5Q9NRA2 495 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 HHLA2Q9UM44 414 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 KCNMB2Q9Y691 235 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 LAMA5O15230 3695 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 NBEAQ8NFP9 2946 aa11.27□□□□□ -0.6
CLIC4-202ENST00000488683 ANKUB1A6NFN9 424 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 RER1O15258 196 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 AKR1C4P17516 323 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 MYBPHQ13203 477 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 TAF13Q15543 124 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 PAPD4Q6PIY7 484 aaKnown RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 TMPPEQ6ZT21 453 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 KCTD9Q7L273 389 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 TRAPPC6BQ86SZ2 158 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM104Q8NE00 496 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ITGB2P05107 769 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 CD37P11049 281 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 GABRA1P14867 456 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 CXADRP78310 365 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 MFSD13AQ14CX5 517 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 PCK2Q16822 640 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 H1FNTQ75WM6 255 aaPredicted RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 PRSS42Q7Z5A4 293 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 ADGRE4PQ86SQ3 457 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 NAXEQ8NCW5 288 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 OR6M1Q8NGM8 313 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 THRSPQ92748 146 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 OR5B2Q96R09 309 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 SELENOIQ9C0D9 397 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 GDF2Q9UK05 429 aaPredicted RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 POLR1DQ9Y2S0 133 aa11.27□□□□□ -0.61
CLIC4-202ENST00000488683 NOP16Q9Y3C1 178 aaKnown RBP11.27□□□□□ -0.61
CLIC4-202ENST00000488683 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 CYB5AP00167 134 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 FOSL2P15408 326 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 HRH1P35367 487 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 BAMBIQ13145 260 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 DHRS2Q13268 280 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 TMEM234Q8WY98 164 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 LIN37Q96GY3 246 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-202ENST00000488683 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 CST11Q9H112 138 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF768Q9H5H4 540 aaKnown RBP11.26□□□□□ -0.61
CLIC4-202ENST00000488683 B3GAT1Q9P2W7 334 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 GPR160Q9UJ42 338 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 hCG_1807616A0A1W2PRN6 198 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 OR6C65A6NJZ3 312 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 BCAT2O15382 392 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-202ENST00000488683 RP2O75695 350 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 VAMP1P23763 118 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-202ENST00000488683 GSG1LQ6UXU4 331 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 CARFQ8N187 725 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 BHLHE23Q8NDY6 225 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 OR10K1Q8NGX5 313 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 MFSD8Q8NHS3 518 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 PDCD10Q9BUL8 212 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 PBOV1Q9GZY1 135 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 CHST11Q9NPF2 352 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 ASH2LQ9UBL3 628 aa11.26□□□□□ -0.61
CLIC4-202ENST00000488683 EEF1E1-BLOC1S5C9J1V9 151 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 SYT7O43581 403 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 ISG15P05161 165 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 OR3A4PP47883 348 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 AKR1C2P52895 323 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 ATP1B3P54709 279 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 TAS2R19P59542 299 aa11.25□□□□□ -0.61
CLIC4-202ENST00000488683 ACTBP60709 375 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms