RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
RER1-207ENST00000488353 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.76□□□□□ -0.37
RER1-207ENST00000488353 TREM2Q9NZC2 230 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 CACFD1Q9UGQ2 172 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 TMED7Q9Y3B3 224 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
RER1-207ENST00000488353 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 BLOC1S5-TXNDC5H3BN57 136 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 TGFBR3LH3BV60 316 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 FCGR3AP08637 254 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 CCKBRP32239 447 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 CD80P33681 288 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
RER1-207ENST00000488353 CX3CR1P49238 355 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 SLC25A1P53007 311 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 PRPS1P60891 318 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 RNASE10Q5GAN6 216 aaKnown RBP12.75□□□□□ -0.37
RER1-207ENST00000488353 DHRS11Q6UWP2 260 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 ETV3LQ6ZN32 361 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 CDC20BQ86Y33 519 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
RER1-207ENST00000488353 OR4C3Q8NH37 302 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 OCSTAMPQ9BR26 566 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 GGACTQ9BVM4 153 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 KPTNQ9Y664 436 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 SDK1Q7Z5N4 2213 aa12.75□□□□□ -0.37
RER1-207ENST00000488353 ARID1BQ8NFD5 2236 aaPredicted RBP12.75□□□□□ -0.37
RER1-207ENST00000488353 A0A0A6YYC8 382 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 METTL21EPA6NDL7 271 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 A6NJ64 397 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 RHPN2P1A8MT19 583 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 I3L1I5 382 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 ST8SIA5O15466 376 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 FBXO24O75426 580 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 CD2P06729 351 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 ARRB1P49407 418 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 DVL1P1P54792 670 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 RAB38P57729 211 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 DEFA6Q01524 100 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 FZD2Q14332 565 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 KIAA0895LQ68EN5 471 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 NPSR1Q6W5P4 371 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 RSC1A1Q92681 617 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 KIRREL1Q96J84 757 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 POLE3Q9NRF9 147 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 SPTY2D1-AS1A0A0U1RR47 76 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 MBTPS2O43462 519 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 CSTAP01040 98 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 CTSEP14091 401 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 RAB5AP20339 215 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 MPZP25189 248 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 LAP3P28838 519 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 SERPINF1P36955 418 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 CENPAP49450 140 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 EGR3Q06889 387 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 HYAL4Q2M3T9 481 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 TEX30Q5JUR7 227 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 OR4S1Q8NGB4 309 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 WDR77Q9BQA1 342 aaPredicted RBP12.74□□□□□ -0.37
RER1-207ENST00000488353 KLK13Q9UKR3 277 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 COL6A3P12111 3177 aa12.74□□□□□ -0.37
RER1-207ENST00000488353 A0A0J9YY10 115 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 HSPB2A8KAH6 182 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 B4DGG1 531 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 EFSO43281 561 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 ACKR3P25106 362 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 HTR2CP28335 458 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 AKR1C3P42330 323 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 HTR5AP47898 357 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 RAB5CP51148 216 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 BTG2P78543 158 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 PMPCAQ10713 525 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 HSPB2Q16082 182 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 KRBOX4Q5JUW0 171 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 ZNF550Q7Z398 422 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 AKR1E2Q96JD6 320 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 OR5B2Q96R09 309 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 ZNF587Q96SQ5 575 aaPredicted RBP12.73□□□□□ -0.37
RER1-207ENST00000488353 GAL3ST1Q99999 423 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 RSRP1Q9BUV0 290 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
RER1-207ENST00000488353 ZMAT3Q9HA38 289 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms