RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ELAC2Q9BQ52 826 aaKnown RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 SLC30A2Q9BRI3 323 aa12.84□□□□□ -0.35
TRIM50-203ENST00000488217 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
TRIM50-203ENST00000488217 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 KRCC1Q9NPI7 259 aaPredicted RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
TRIM50-203ENST00000488217 LRCH1Q9Y2L9 728 aa12.84□□□□□ -0.35
TRIM50-203ENST00000488217 LHFPL6Q9Y693 200 aa12.84□□□□□ -0.35
TRIM50-203ENST00000488217 LRRC30A6NM36 301 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 DCTN6O00399 190 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 GMNNO75496 209 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 CYB5R3P00387 301 aaPredicted RBP12.83□□□□□ -0.36
TRIM50-203ENST00000488217 PMELP40967 661 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 PSME3P61289 254 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 MEP1BQ16820 701 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 DNM1P34Q6PK57 102 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 BTNL3Q6UXE8 466 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 COLCA1Q6ZS62 124 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
TRIM50-203ENST00000488217 OR10AD1Q8NGE0 317 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 SLC25A28Q96A46 364 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
TRIM50-203ENST00000488217 CDADC1Q9BWV3 514 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 HCAR1Q9BXC0 346 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 HDHD2Q9H0R4 259 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 POLR1DQ9Y2S0 133 aa12.83□□□□□ -0.36
TRIM50-203ENST00000488217 IGHV3-64DA0A0J9YX35 117 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 KIR2DS1A0A191URI9 304 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 IQCF6A8MYZ5 107 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 F5H5P2 479 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 CLDN34H7C241 214 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 MLNRO43193 412 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 WIPF1O43516 503 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 DIRAS1O95057 198 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 RPS2P15880 293 aaKnown RBP12.82□□□□□ -0.36
TRIM50-203ENST00000488217 SELEP16581 610 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 MTNR1AP48039 350 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 NUDT2P50583 147 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 GNB2P62879 340 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 COX10Q12887 443 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 ECH1Q13011 328 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 KRTAP27-1Q3LI81 207 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 MOGAT3Q86VF5 341 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 KLBQ86Z14 1044 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 CMTM5Q96DZ9 223 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
TRIM50-203ENST00000488217 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 FUZQ9BT04 418 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 WDR76Q9H967 626 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 ABCD2Q9UBJ2 740 aa12.82□□□□□ -0.36
TRIM50-203ENST00000488217 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
TRIM50-203ENST00000488217 IGLV1-36A0A0B4J1U3 117 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 A0A1B0GWJ7 208 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 F5H5K5 113 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 ARPC3O15145 178 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 TMPRSS2O15393 492 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SNX3O60493 162 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 PPP1R3DO95685 299 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 RENP00797 406 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 HLA-DPB1P04440 258 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 RNASE1P07998 156 aaKnown RBP12.81□□□□□ -0.36
TRIM50-203ENST00000488217 IGHV4-38-2P0DP08 117 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 FPR3P25089 353 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SMIM11AP58511 58 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SLC9A3R2Q15599 337 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SLC36A3Q495N2 470 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 LEG1Q6P5S2 330 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 PIGWQ7Z7B1 504 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 NAA40Q86UY6 237 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 BHLHE23Q8NDY6 225 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 OR2AJ1Q8NGZ0 328 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
TRIM50-203ENST00000488217 PYURFQ96I23 114 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 CCT8L2Q96SF2 557 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 PITX2Q99697 317 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 ZNF696Q9H7X3 374 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 GORASP2Q9H8Y8 452 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 SOX21Q9Y651 276 aaPredicted RBP12.81□□□□□ -0.36
TRIM50-203ENST00000488217 TRRAPQ9Y4A5 3859 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 ARHGAP32A7KAX9 2087 aa12.81□□□□□ -0.36
TRIM50-203ENST00000488217 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 IGHV2-70DA0A0C4DH43 119 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 ACSM4P0C7M7 580 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 IRF2P14316 349 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
TRIM50-203ENST00000488217 SLC6A6P31641 620 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms