RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SBK2P0C263 348 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 PSKH1P11801 424 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 CD53P19397 219 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 TUBG1P23258 451 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 PPP1CBP62140 327 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 ADARB1P78563 741 aaKnown RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 MOGQ16653 247 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 SPATA46Q5T0L3 261 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF101Q8IZC7 436 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 OR10H4Q8NGA5 316 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 MRPL24Q96A35 216 aaKnown RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 RNFT2Q96EX2 444 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 TRMT61AQ96FX7 289 aaKnown RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 SYT3Q9BQG1 590 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 TRAF4Q9BUZ4 470 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 MROQ9BYG7 248 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 SP140LQ9H930 580 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 ADGRL4Q9HBW9 690 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 TUBG2Q9NRH3 451 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 FBXO9Q9UK97 447 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 IKZF2Q9UKS7 526 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
C9orf3-219ENST00000488186 PCDHGB1Q9Y5G3 927 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 OTOGQ6ZRI0 2925 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 APOL3O95236 402 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 ACSM4P0C7M7 580 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 OR2T7P0C7T2 308 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 ALOX5APP20292 161 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 AQP4P55087 323 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-219ENST00000488186 ERVS71-1P61550 626 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 MALLQ13021 153 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 DRAM2Q6UX65 266 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 DTX2Q86UW9 622 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 OR10S1Q8NGN2 331 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 OR2T27Q8NH04 317 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 SLC25A40Q8TBP6 338 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 TBX5Q99593 518 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 OR2J1Q9GZK6 312 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-219ENST00000488186 ITGB1BP2Q9UKP3 347 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 HSPE1-MOB4S4R3N1 261 aa13.54□□□□□ -0.24
C9orf3-219ENST00000488186 J3QW42 95 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 CD8AP01732 235 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 MT-ND5P03915 603 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 ANXA2P07355 339 aaKnown RBP13.53□□□□□ -0.24
C9orf3-219ENST00000488186 GABRB1P18505 474 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 VHLP40337 213 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 HSPA13P48723 471 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 CX3CR1P49238 355 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 EVX1P49640 407 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 CXCR4P61073 352 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-219ENST00000488186 EFNB3Q15768 340 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 NKPD1Q17RQ9 610 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 C6orf52Q5T4I8 152 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 LRRN1Q6UXK5 716 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 RFPL4BQ6ZWI9 263 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 IGFBPL1Q8WX77 278 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 MRPL48Q96GC5 212 aaKnown RBP13.53□□□□□ -0.24
C9orf3-219ENST00000488186 AMELYQ99218 206 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 FOXC2Q99958 501 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 CACNG6Q9BXT2 260 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 TTTY10Q9BZA0 68 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 MRPL37Q9BZE1 423 aaKnown RBP13.53□□□□□ -0.24
C9orf3-219ENST00000488186 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 NIPAL2Q9H841 368 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 BRD7Q9NPI1 651 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
C9orf3-219ENST00000488186 PRRC2AP48634 2157 aaKnown RBP13.52□□□□□ -0.24
C9orf3-219ENST00000488186 DAPL1A0PJW8 107 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 PSMD9O00233 223 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 TBX1O43435 398 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 ICMTO60725 284 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 CLPTM1O96005 669 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF250P15622 560 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 CDKN1AP38936 164 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 OPRL1P41146 370 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 RIDAP52758 137 aaKnown RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 SWI5Q1ZZU3 235 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 KLHL22Q53GT1 634 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 DEGS2Q6QHC5 323 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF322Q6U7Q0 402 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-219ENST00000488186 NAA40Q86UY6 237 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF679Q8IYX0 411 aa13.52□□□□□ -0.25
C9orf3-219ENST00000488186 CNIH3Q8TBE1 160 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms