RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 AVPI1Q5T686 147 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 PRAMEF20Q5VT98 475 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 RPL13AP3Q6NVV1 102 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 ZNF546Q86UE3 836 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 SPAG16Q8N0X2 631 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 OR4C16Q8NGL9 310 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 METTL7AQ9H8H3 244 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 TMEM27Q9HBJ8 222 aa12.25□□□□□ -0.45
COPS7B-221ENST00000488111 A0A1B0GWA3 101 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 A0A1W2PQD3 144 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 SULT1C2O00338 296 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 GNB5O14775 395 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 BCL2L11O43521 198 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 RCBTB2O95199 551 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 NUDT14O95848 222 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 RLN1P04808 185 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 CRYBA1P05813 215 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 LUMP51884 338 aaPredicted RBP12.24□□□□□ -0.45
COPS7B-221ENST00000488111 ACTA2P62736 377 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 ACTG2P63267 376 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 CRMP1Q14194 572 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 OPN5Q6U736 354 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 WDR88Q6ZMY6 472 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 KRT77Q7Z794 578 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 GLB1L2Q8IW92 636 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 MIB2Q96AX9 1013 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 IP6K3Q96PC2 410 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 ZNF559Q9BR84 538 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 ZNF251Q9BRH9 671 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 SLC25A18Q9H1K4 315 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 ZFP57Q9NU63 452 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 PCDHB10Q9UN67 800 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 WASF3Q9UPY6 502 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
COPS7B-221ENST00000488111 TRBV2A0A0J9YWF9 115 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 RIIAD1A6NNX1 92 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 G3V3Y1 287 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 H7C417 338 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 SGCEO43556 437 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 GPRIN2O60269 458 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 GLSO94925 669 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 OR2F2O95006 317 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 CD8AP01732 235 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 HEXAP06865 529 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 CLDN12P56749 244 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 OR2F1Q13607 317 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 TOMM34Q15785 309 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 PAN3Q58A45 887 aaKnown RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 LY6G6FQ5SQ64 297 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 H3F3CQ6NXT2 135 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 C11orf88Q6PI97 169 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 BEST3Q8N1M1 668 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 CLEC1AQ8NC01 280 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 OR1S2Q8NGQ3 325 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 FER1L6-AS2Q96M78 137 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 TTTY10Q9BZA0 68 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 LAT2Q9GZY6 243 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 CHCHD2Q9Y6H1 151 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 V9GY05 133 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 MAGEB4O15481 346 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 TLX3O43711 291 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 SLC25A12O75746 678 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 EDNRAP25101 427 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 BDKRB2P30411 391 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 PTGDSP41222 190 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 AIMP2Q13155 320 aaKnown RBP12.23□□□□□ -0.45
COPS7B-221ENST00000488111 MDGA2Q7Z553 956 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 PFN4Q8NHR9 129 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 ZNF563Q8TA94 476 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 PDCD1LG2Q9BQ51 273 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 C1orf198Q9H425 327 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 TMEM138Q9NPI0 162 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 C20orf141Q9NUB4 165 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 ICAM5Q9UMF0 924 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 ETV7Q9Y603 341 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
COPS7B-221ENST00000488111 A0A0B4J2E0 115 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 A0A1B0GX12 115 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 MEX3AA1L020 520 aaKnown RBP12.22□□□□□ -0.45
COPS7B-221ENST00000488111 KLK10O43240 276 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 CDC40O60508 579 aaKnown RBP eCLIP12.22□□□□□ -0.45
COPS7B-221ENST00000488111 LYPD3O95274 346 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 WISP1O95388 367 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 S100A8P05109 93 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 CCL3P10147 92 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 ZNF3P17036 446 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 HCCSP53701 268 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 SNTB1Q13884 538 aaKnown RBP12.22□□□□□ -0.45
COPS7B-221ENST00000488111 PCGF3Q3KNV8 242 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 LINC00696Q6ZRV3 163 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
COPS7B-221ENST00000488111 C2CD4CQ8TF44 421 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms