RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 KCTD20Q7Z5Y7 419 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 OR10H4Q8NGA5 316 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 NEUROG1Q92886 237 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF799Q96GE5 643 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 SP140LQ9H930 580 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 FGF20Q9NP95 211 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-207ENST00000487645 INPP5EQ9NRR6 644 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 FAIMQ9NVQ4 179 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 CNOT2Q9NZN8 540 aaKnown RBP11.48□□□□□ -0.57
COL4A6-207ENST00000487645 EDARQ9UNE0 448 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
COL4A6-207ENST00000487645 DAPL1A0PJW8 107 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 EFCAB10A6NFE3 127 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 ACOD1A6NK06 481 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 H3BSA7 217 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 SMPD2O60906 423 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 SULT1C4O75897 302 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 APOL3O95236 402 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 IGHA1P01876 353 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 FAM157BP0CG42 384 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 PIPP12273 146 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-207ENST00000487645 DCKP27707 260 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 THBS4P35443 961 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 FABP6P51161 128 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 SNTB2Q13425 540 aaKnown RBP11.47□□□□□ -0.57
COL4A6-207ENST00000487645 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 C20orf204Q6ZNR8 217 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 PLEKHG7Q6ZR37 379 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 SPATC1Q76KD6 591 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 NAA40Q86UY6 237 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF101Q8IZC7 436 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 OR52I1Q8NGK6 324 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 OR1J1Q8NGS3 322 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 GGHQ92820 318 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 APOBEC3DQ96AK3 386 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-207ENST00000487645 MRPL48Q96GC5 212 aaKnown RBP11.47□□□□□ -0.57
COL4A6-207ENST00000487645 JAM3Q9BX67 310 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 SLCO1C1Q9NYB5 712 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 PSORS1C1Q9UIG5 152 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 STARD10Q9Y365 291 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 CMAHPQ9Y471 501 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 LRP12Q9Y561 859 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
COL4A6-207ENST00000487645 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.57
COL4A6-207ENST00000487645 NGFP01138 241 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 LCATP04180 440 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 LCKP06239 509 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 DANCRP0C864 163 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF250P15622 560 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 TTKP33981 857 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 SERPINF1P36955 418 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 CX3CR1P49238 355 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 EVX1P49640 407 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 PRKXP51817 358 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 RIDAP52758 137 aaKnown RBP11.46□□□□□ -0.57
COL4A6-207ENST00000487645 PPP1CBP62140 327 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF85Q03923 595 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 GALEQ14376 348 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ADIPOQQ15848 244 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF718Q3SXZ3 478 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF684Q5T5D7 378 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 RGS7BPQ6MZT1 257 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-207ENST00000487645 FBXL14Q8N1E6 418 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ZNF283Q8N7M2 679 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 BPIFB6Q8NFQ5 453 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ABHD4Q8TB40 342 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 SNX33Q8WV41 574 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
COL4A6-207ENST00000487645 CNBD2Q96M20 576 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 TBX5Q99593 518 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 SCN3BQ9NY72 215 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 IKZF2Q9UKS7 526 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 MYRFQ9Y2G1 1151 aa11.46□□□□□ -0.57
COL4A6-207ENST00000487645 ABCA12Q86UK0 2595 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 METTL15A6NJ78 407 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 GPRIN2O60269 458 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 FAM20BO75063 409 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 KRT8P05787 483 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 TACSTD2P09758 323 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 OR4A8P0C604 315 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 SLC6A9P48067 706 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 MMP16P51512 607 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 SELENOVP59797 346 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 KRTAP10-9P60411 292 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 ST3GAL4Q11206 333 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 EFNB3Q15768 340 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 AGAP6Q5VW22 663 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
COL4A6-207ENST00000487645 VHLLQ6RSH7 139 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 RFPL4BQ6ZWI9 263 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 SSX6Q7RTT6 188 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 PRSS45Q7RTY3 260 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms