RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 RNF13O43567 381 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 RAMP3O60896 148 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 AGR2O95994 175 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 AMY1AP04745 511 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 AMY2AP04746 511 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 SNRPAP09012 282 aaKnown RBP4.62□□□□□ -1.67
COL4A3-206ENST00000487633 NEFHP12036 1026 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 RAC2P15153 192 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 PRPS1L1P21108 318 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 GSTM3P21266 225 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 CD24P25063 80 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 SERPINB5P36952 375 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 CD200P41217 278 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ARHGDIAP52565 204 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 UGT2B15P54855 530 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ACSM1Q08AH1 577 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 OR1Q1Q15612 314 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF74Q16587 644 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 DGUOKQ16854 277 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 CEP85LQ5SZL2 805 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ARMC4Q5T2S8 1044 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 LINC00114Q6XXX2 140 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 TIFABQ6ZNK6 161 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 LCNL1Q6ZST4 164 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 DPPA2Q7Z7J5 298 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 CENPVQ7Z7K6 275 aaPredicted RBP4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ZER1Q7Z7L7 766 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 NAA40Q86UY6 237 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 C10orf107Q8IVU9 208 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 C1orf87Q8N0U7 546 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 LSMEM1Q8N8F7 131 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 FNDC5Q8NAU1 212 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 MNS1Q8NEH6 495 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 SPATA4Q8NEY3 305 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 OR8J2Q8NGG1 315 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 OR13G1Q8NGZ3 307 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 MOSPD2Q8NHP6 518 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 PPP1R36Q96LQ0 422 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 RNF7Q9UBF6 113 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 KAAG1Q9UBP8 84 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ANGPT4Q9Y264 503 aa4.62□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF256Q9Y2P7 627 aaPredicted RBP4.62□□□□□ -1.67
COL4A3-206ENST00000487633 PRSS51A0A1B0GVH4 220 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 CCDC154A6NI56 674 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 LRRC30A6NM36 301 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 TMEM114B3SHH9 223 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 H7C1C5 153 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 IFNL4K9M1U5 179 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 KPNA4O00629 521 aaPredicted RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 LYPLA1O75608 230 aaPredicted RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 SLC22A3O75751 556 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 IGHG1P01857 330 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 LPLP06858 475 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 CST2P09228 141 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ASAH2BP0C7U1 165 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 MYL2P10916 166 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ACADSP16219 412 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 BGNP21810 368 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 COX7A1P24310 79 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RPL3P39023 403 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RGS6P49758 472 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF84P51523 738 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 NME5P56597 212 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RAB25P57735 213 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 LCN6P62502 163 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RPL23AP62750 156 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RPL18Q07020 188 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 PCLAFQ15004 111 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 WHAMMP3Q1A5X7 153 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 PDCD4Q53EL6 469 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 CCDC92Q53HC0 331 aaPredicted RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 TEX36Q5VZQ5 186 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 UNQ9370/PRO34162Q6UXP9 181 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 FBXW12Q6X9E4 464 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 FOXL2NBQ6ZUU3 175 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 OR2W3Q7Z3T1 314 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 NPEPL1Q8NDH3 523 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 OR4D11Q8NGI4 311 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 TCP10LQ8TDR4 215 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 H1FXQ92522 213 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 DUS3LQ96G46 650 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF582Q96NG8 517 aaPredicted RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 FAM110AQ9BQ89 295 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 FAM234AQ9H0X4 552 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ZMAT4Q9H898 229 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 C12orf10Q9HB07 376 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 RAB18Q9NP72 206 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 NANSQ9NR45 359 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 SNTG1Q9NSN8 517 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 C1orf123Q9NWV4 160 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 LINC00527Q9UJ94 153 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 ZNF180Q9UJW8 692 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 NDUFAF1Q9Y375 327 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 UTP11Q9Y3A2 253 aaKnown RBP4.61□□□□□ -1.67
COL4A3-206ENST00000487633 TIMM10BQ9Y5J6 103 aa4.61□□□□□ -1.67
COL4A3-206ENST00000487633 A0A1W2PPL8 197 aa4.6□□□□□ -1.67
COL4A3-206ENST00000487633 MEX3AA1L020 520 aaKnown RBP4.6□□□□□ -1.67
COL4A3-206ENST00000487633 FAM90A8PA6NJQ4 464 aa4.6□□□□□ -1.67
COL4A3-206ENST00000487633 VGLL3A8MV65 326 aa4.6□□□□□ -1.67
COL4A3-206ENST00000487633 BLOC1S5-TXNDC5H3BN57 136 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms