RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 HRH3Q9Y5N1 445 aa23.24■■□□□ 1.31
HLA-C-208ENST00000487245 FREM3P0C091 2139 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 EYSQ5T1H1 3165 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 SHISA8B8ZZ34 492 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 RPA2P15927 270 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 ADH6P28332 368 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 HSD11B1P28845 292 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 EIF1P41567 113 aaKnown RBP23.23■■□□□ 1.31
HLA-C-208ENST00000487245 DUSP3P51452 185 aaPredicted RBP23.23■■□□□ 1.31
HLA-C-208ENST00000487245 SRSF4Q08170 494 aaKnown RBP23.23■■□□□ 1.31
HLA-C-208ENST00000487245 C4orf46Q504U0 113 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 LINC00346Q8IVM7 164 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 PCNPQ8WW12 178 aaKnown RBP23.23■■□□□ 1.31
HLA-C-208ENST00000487245 MRPL13Q9BYD1 178 aaKnown RBP23.23■■□□□ 1.31
HLA-C-208ENST00000487245 REG4Q9BYZ8 158 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 PTGES2Q9H7Z7 377 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 TMEM138Q9NPI0 162 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 FSCN3Q9NQT6 498 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 RAB22AQ9UL26 194 aa23.23■■□□□ 1.31
HLA-C-208ENST00000487245 DCDC2BA2VCK2 349 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 ARPC5O15511 151 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 OR4E1P0C645 316 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 LAP3P28838 519 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 SPOCK1Q08629 439 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 KLHL24Q6TFL4 600 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 CHMP1BQ7LBR1 199 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 C12orf45Q8N5I9 185 aaPredicted RBP23.22■■□□□ 1.31
HLA-C-208ENST00000487245 OR4K17Q8NGC6 315 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 C11orf40Q8WZ69 217 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 AQP3Q92482 292 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 FAM206AQ9NX38 181 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 SLC2A8Q9NY64 477 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 B3GAT1Q9P2W7 334 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 IGKV1D-43A0A0B4J1Z2 117 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 CYB5AP00167 134 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 MEF2DQ14814 521 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 ZNF239Q16600 458 aaKnown RBP23.22■■□□□ 1.31
HLA-C-208ENST00000487245 RGS7BPQ6MZT1 257 aaPredicted RBP23.22■■□□□ 1.31
HLA-C-208ENST00000487245 WDFY1Q8IWB7 410 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 GALNT16Q8N428 558 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 JAGN1Q8N5M9 183 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 FADS6Q8N9I5 356 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 CENPMQ9NSP4 180 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 RDH8Q9NYR8 311 aa23.22■■□□□ 1.31
HLA-C-208ENST00000487245 GDF2Q9UK05 429 aaPredicted RBP23.22■■□□□ 1.31
HLA-C-208ENST00000487245 TRIOO75962 3097 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 PI4KAP42356 2102 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 C19orf67A6NJJ6 358 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 RFPL4AA6NLU0 287 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 ZNF736B4DX44 427 aaPredicted RBP23.21■■□□□ 1.31
HLA-C-208ENST00000487245 RFPL4AL1F8VTS6 287 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 CFIP05156 583 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 KLK3P07288 261 aaPredicted RBP23.21■■□□□ 1.31
HLA-C-208ENST00000487245 PCOLCEQ15113 449 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 ZMYND11Q15326 602 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 TINAGL1Q9GZM7 467 aaPredicted RBP23.21■■□□□ 1.31
HLA-C-208ENST00000487245 HDGFL3Q9Y3E1 203 aa23.21■■□□□ 1.31
HLA-C-208ENST00000487245 ASCC3Q8N3C0 2202 aaKnown RBP23.2■■□□□ 1.31
HLA-C-208ENST00000487245 METTL21EPA6NDL7 271 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 MFSD2BA6NFX1 497 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 IGHG1P01857 330 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 AMY2AP04746 511 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 NMBP08949 121 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 ACSM4P0C7M7 580 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 TDGF1P13385 188 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 BDKRB2P30411 391 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 CLRN1P58418 232 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 CLVS2Q5SYC1 327 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 PEAR1Q5VY43 1037 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-208ENST00000487245 TMEM65Q6PI78 240 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF813Q6ZN06 617 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 SLAMF6Q96DU3 332 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 NKX3-1Q99801 234 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-208ENST00000487245 NUDT16L1Q9BRJ7 211 aaKnown RBP23.2■■□□□ 1.3
HLA-C-208ENST00000487245 CYB5R1Q9UHQ9 305 aa23.2■■□□□ 1.3
HLA-C-208ENST00000487245 FXYD6-FXYD2A0A087WZ82 144 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 A0A087WZY1 265 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 P2RY10O00398 339 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 UBE2MP61081 183 aaKnown RBP23.19■■□□□ 1.3
HLA-C-208ENST00000487245 SFRP5Q5T4F7 317 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 ATPAF1Q5TC12 328 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-208ENST00000487245 LPCAT3Q6P1A2 487 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 TMEM81Q6P7N7 255 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 GSG1LQ6UXU4 331 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 OR4D6Q8NGJ1 314 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 OR6K3Q8NGY3 331 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 OXGR1Q96P68 337 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 UQCC2Q9BRT2 126 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 EMC6Q9BV81 110 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 ARL6Q9H0F7 186 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 FXYD6Q9H0Q3 95 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 ZNF224Q9NZL3 707 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 FBLN5Q9UBX5 448 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 KLK13Q9UKR3 277 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 CACNA1CQ13936 2221 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 A0A1B0GTI1 187 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 SCGNO76038 276 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 BPNT1O95861 308 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 CD8AP01732 235 aa23.19■■□□□ 1.3
HLA-C-208ENST00000487245 P2RY4P51582 365 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms