RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 HLXQ14774 488 aaPredicted RBP6.1□□□□□ -1.43
UBE4B-209ENST00000487244 TRIP10Q15642 601 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 TMEM249Q2WGJ8 235 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 SPRNQ5BIV9 151 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 C1orf146Q5VVC0 180 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
UBE4B-209ENST00000487244 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 ACSM5Q6NUN0 579 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 ASRGL1Q7L266 308 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 PROKR2Q8NFJ6 384 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 OR2T33Q8NG76 320 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 TEX47Q8TBZ9 253 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 YIPF5Q969M3 257 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 MAP6Q96JE9 813 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 PIMREGQ9BSJ6 248 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 HINT3Q9NQE9 182 aaKnown RBP6.1□□□□□ -1.43
UBE4B-209ENST00000487244 EIF3KQ9UBQ5 218 aaKnown RBP6.1□□□□□ -1.43
UBE4B-209ENST00000487244 DNAJB9Q9UBS3 223 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 CYB5R1Q9UHQ9 305 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 NDRG4Q9ULP0 352 aaKnown RBP6.1□□□□□ -1.43
UBE4B-209ENST00000487244 STARD10Q9Y365 291 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 CACNG2Q9Y698 323 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 COMMD3-BMI1R4GMX3 469 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 ARHGAP32A7KAX9 2087 aa6.1□□□□□ -1.43
UBE4B-209ENST00000487244 ATRQ13535 2644 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 LOC390937A0A1W2PQ73 354 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 RIIAD1A6NNX1 92 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 C17orf100A8MU93 164 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 M0R129 80 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 WNT9BO14905 357 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 SPRY3O43610 288 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 CDC14BO60729 498 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 MITFO75030 526 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 RP2O75695 350 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ATP5HO75947 161 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 IGHV1-46P01743 117 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ERCC1P07992 297 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 IGHV4-31P0DP07 118 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF16P17020 682 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 USF1P22415 310 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 GIFP27352 417 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 GRK5P34947 590 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 RASSF2P50749 326 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 SLC25A1P53007 311 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 LOXL1Q08397 574 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 PSG7Q13046 419 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 GINS1Q14691 196 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ATP6AP1Q15904 470 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 KRTAP27-1Q3LI81 207 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF718Q3SXZ3 478 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 LINC01590Q5TEZ4 76 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 TMEM236Q5W0B7 351 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 FAHD1Q6P587 224 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 SHQ1Q6PI26 577 aaKnown RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 Q6ZR03 302 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 AMIGO2Q86SJ2 522 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 NAA40Q86UY6 237 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF786Q8N393 782 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ATG16L2Q8NAA4 619 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 BBS1Q8NFJ9 593 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 GJC3Q8NFK1 279 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 OR6K6Q8NGW6 343 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 OR2T4Q8NH00 348 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 OTULINQ96BN8 352 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 PITX2Q99697 317 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ATF6BQ99941 703 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 WACQ9BTA9 647 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 HDHD2Q9H0R4 259 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 MS4A5Q9H3V2 200 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 NARFLQ9H6Q4 476 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 MYOZ1Q9NP98 299 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 CMC2Q9NRP2 79 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF275Q9NSD4 429 aaPredicted RBP6.09□□□□□ -1.43
UBE4B-209ENST00000487244 TBCCD1Q9NVR7 557 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 TREM2Q9NZC2 230 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 PTTG3PQ9NZH4 202 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 KLHL21Q9UJP4 597 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 BAIAP2Q9UQB8 552 aa6.09□□□□□ -1.43
UBE4B-209ENST00000487244 F5H5K5 113 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 NDUFS8O00217 210 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 SURF4O15260 269 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 CD5LO43866 347 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 TIMM8AO60220 97 aaPredicted RBP6.08□□□□□ -1.44
UBE4B-209ENST00000487244 SPARCP09486 303 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 ACSM4P0C7M7 580 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 OSMP13725 252 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF3P17036 446 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 EPHA2P29317 976 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 GCH1P30793 250 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 ENTPD1P49961 510 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 DAPP51397 102 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 ZNF81P51508 661 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 ARHGDIAP52565 204 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 SELENOVP59797 346 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 CDK5Q00535 292 aa6.08□□□□□ -1.44
UBE4B-209ENST00000487244 GK3PQ14409 553 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms