RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NAA40Q86UY6 237 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 OR13G1Q8NGZ3 307 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 MEGF10Q96KG7 1140 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 NSMCE2Q96MF7 247 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 JMJD8Q96S16 334 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 ARL8BQ9NVJ2 186 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 OR6C68A6NDL8 312 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 F5H5K5 113 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 MLNRO43193 412 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 CYB5R3P00387 301 aaPredicted RBP20.62■□□□□ 0.89
LIME1-206ENST00000487026 FABP3P05413 133 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 NOS3P29474 1203 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 MDH2P40926 338 aaKnown RBP20.62■□□□□ 0.89
LIME1-206ENST00000487026 ZNF154Q13106 437 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 SLC18B1Q6NT16 456 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 SLC27A4Q6P1M0 643 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 ZDHHC22Q8N966 263 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 SDR9C7Q8NEX9 313 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 DVL3Q92997 716 aaPredicted RBP20.62■□□□□ 0.89
LIME1-206ENST00000487026 PITX2Q99697 317 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 CDADC1Q9BWV3 514 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 TMCC3Q9ULS5 477 aa20.62■□□□□ 0.89
LIME1-206ENST00000487026 TMEM89A2RUT3 159 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 F5H0A9 414 aaPredicted RBP20.61■□□□□ 0.89
LIME1-206ENST00000487026 F5H5P2 479 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 HLA-DQA2P01906 255 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 HLA-DPB1P04440 258 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 SELEP16581 610 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 FPR2P25090 351 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 GSSP48637 474 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 SAMD4BQ5PRF9 694 aaKnown RBP20.61■□□□□ 0.89
LIME1-206ENST00000487026 ZBTB46Q86UZ6 589 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 PGAM4Q8N0Y7 254 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 OR52E2Q8NGJ4 325 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 GNPDA2Q8TDQ7 276 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 SLC30A2Q9BRI3 323 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 RBM4Q9BWF3 364 aaKnown RBP20.61■□□□□ 0.89
LIME1-206ENST00000487026 NSRP1Q9H0G5 558 aaKnown RBP20.61■□□□□ 0.89
LIME1-206ENST00000487026 POLR3KQ9Y2Y1 108 aaPredicted RBP20.61■□□□□ 0.89
LIME1-206ENST00000487026 PPIAL4AQ9Y536 164 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 AUP1Q9Y679 476 aa20.61■□□□□ 0.89
LIME1-206ENST00000487026 CEACAM18A8MTB9 384 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 ACSM4P0C7M7 580 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 ZNF12P17014 697 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 SRP9P49458 86 aaKnown RBP20.6■□□□□ 0.89
LIME1-206ENST00000487026 KRTAP27-1Q3LI81 207 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 SLC36A3Q495N2 470 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 CLEC12AQ5QGZ9 265 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 PGBD2Q6P3X8 592 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 COLCA1Q6ZS62 124 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 MOGAT3Q86VF5 341 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 OR2AJ1Q8NGZ0 328 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 C1QTNF5Q9BXJ0 243 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 EGLN3Q9H6Z9 239 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 TMEM165Q9HC07 324 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 IL1RAPQ9NPH3 570 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 CYB5R1Q9UHQ9 305 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 INSIG2Q9Y5U4 225 aa20.6■□□□□ 0.89
LIME1-206ENST00000487026 IQCF6A8MYZ5 107 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 WNT2P09544 360 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 GGT2P36268 569 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 IFNGR2P38484 337 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 PMELP40967 661 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 COMPP49747 757 aaPredicted RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 GYS2P54840 703 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.59■□□□□ 0.89
LIME1-206ENST00000487026 TSPAN31Q12999 210 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 GK2Q14410 553 aaPredicted RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 ESCO2Q56NI9 601 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 ARMCX4Q5H9R4 360 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 KLF17Q5JT82 389 aaPredicted RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 FAM201AQ5SY85 155 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 ZDHHC21Q8IVQ6 265 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 MUC20Q8N307 709 aaPredicted RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 SIGLECL1Q8N7X8 197 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 C3orf56Q8N813 242 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 POP5Q969H6 163 aaKnown RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 HCAR1Q9BXC0 346 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 PLA2G12AQ9BZM1 189 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 TMEM100Q9NV29 134 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 MRPL22Q9NWU5 206 aaKnown RBP20.59■□□□□ 0.89
LIME1-206ENST00000487026 ZNF69Q9UC07 566 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 TAGLN3Q9UI15 199 aa20.59■□□□□ 0.89
LIME1-206ENST00000487026 ATP8B1O43520 1251 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 IDH3BO43837 385 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 LCATP04180 440 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 PYCR1P32322 319 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 TRAP1Q12931 704 aaKnown RBP20.58■□□□□ 0.89
LIME1-206ENST00000487026 ZNF620Q6ZNG0 422 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 DEFB107AQ8IZN7 70 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 BCL6BQ8N143 479 aaPredicted RBP20.58■□□□□ 0.89
LIME1-206ENST00000487026 SLCO4A1Q96BD0 722 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 ATF6BQ99941 703 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 PNRC2Q9NPJ4 139 aaKnown RBP20.58■□□□□ 0.89
LIME1-206ENST00000487026 NUP50Q9UKX7 468 aa20.58■□□□□ 0.89
LIME1-206ENST00000487026 A8MXK9 166 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 IFNL4K9M1U5 179 aa20.57■□□□□ 0.88
LIME1-206ENST00000487026 RPS27P42677 84 aaKnown RBP20.57■□□□□ 0.88
LIME1-206ENST00000487026 UBA52P62987 128 aaKnown RBP20.57■□□□□ 0.88
LIME1-206ENST00000487026 ECH1Q13011 328 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms