RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ITGA3P26006 1051 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 WBP2NLQ6ICG8 309 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 RAB11FIP2Q7L804 512 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 ATG4DQ86TL0 474 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-211ENST00000486901 ABCA7Q8IZY2 2146 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 ZSCAN4Q8NAM6 433 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-211ENST00000486901 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
HSPG2-211ENST00000486901 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 CTSFQ9UBX1 484 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 HIF3AQ9Y2N7 669 aa11.1□□□□□ -0.63
HSPG2-211ENST00000486901 CCDC85CA6NKD9 419 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 C9JQL5 133 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 WDPCPO95876 746 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 MUC1P15941 1255 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PTGFRP43088 359 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 ASCL1P50553 236 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 RIDAP52758 137 aaKnown RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 RAB38P57729 211 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 EXD3Q8N9H8 876 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PNLDC1Q8NA58 520 aaKnown RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 SLC26A10Q8NG04 563 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PHYHIPQ92561 330 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 OR8B4Q96RC9 309 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 FBXL21Q9UKT6 434 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 VDAC3Q9Y277 283 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 LINC01565O15544 149 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF264O43296 627 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 LRP3O75074 770 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 ADH1BP00325 375 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 SNRNP70P08621 437 aaKnown RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 CTSEP14091 401 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 ABOP16442 354 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 CAPZA2P47755 286 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 OR2B8PP59922 312 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-211ENST00000486901 ADAMTS18Q8TE60 1221 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 CMTM3Q96MX0 182 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PHB2Q99623 299 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 NUDT9Q9BW91 350 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 PIGMQ9H3S5 423 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 IL23AQ9NPF7 189 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
HSPG2-211ENST00000486901 A0A1W2PPE3 182 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF117Q03924 483 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 EEF1A1P5Q5VTE0 462 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 SLC18B1Q6NT16 456 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 TMEM104Q8NE00 496 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 AKR1E2Q96JD6 320 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 ZNF587Q96SQ5 575 aaPredicted RBP11.08□□□□□ -0.63
HSPG2-211ENST00000486901 G6PC3Q9BUM1 346 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 DUSP15Q9H1R2 295 aaPredicted RBP11.08□□□□□ -0.63
HSPG2-211ENST00000486901 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.63
HSPG2-211ENST00000486901 NIT2Q9NQR4 276 aa11.08□□□□□ -0.63
HSPG2-211ENST00000486901 MED6O75586 246 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 MEOX2P50222 304 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 HHEXQ03014 270 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 C1orf189Q5VU69 101 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 LYG2Q86SG7 212 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF679Q8IYX0 411 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 LRRC75AQ8NAA5 344 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 CLCC1Q96S66 551 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 LAT2Q9GZY6 243 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 RPS10P5Q9NQ39 176 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 RPH3AQ9Y2J0 694 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-211ENST00000486901 EFCAB7A8K855 629 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 FOXS1O43638 330 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 MTRF1O75570 445 aaKnown RBP11.08□□□□□ -0.64
HSPG2-211ENST00000486901 RNH1P13489 461 aaKnown RBP11.08□□□□□ -0.64
HSPG2-211ENST00000486901 PRMT2P55345 433 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
HSPG2-211ENST00000486901 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 IFT22Q9H7X7 185 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-211ENST00000486901 POLEQ07864 2286 aa11.08□□□□□ -0.64
HSPG2-211ENST00000486901 MEX3AA1L020 520 aaKnown RBP11.07□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF354AO60765 605 aaPredicted RBP11.07□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF432O94892 652 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 OR2F2O95006 317 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 ASAH2BP0C7U1 165 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 MYF5P13349 255 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 ZBTB25P24278 435 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 PSMB6P28072 239 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 GPR3P46089 330 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 GFERP55789 205 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 OR2F1Q13607 317 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 CLINT1Q14677 625 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 NFATC4Q14934 902 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 ZNF141Q15928 474 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 SGCAQ16586 387 aa11.07□□□□□ -0.64
HSPG2-211ENST00000486901 AWAT2Q6E213 333 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms