RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 OR1M1Q8NGA1 313 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 SMIM4Q8WVI0 70 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ZC3H10Q96K80 434 aaKnown RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 AMELYQ99218 206 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 PHB2Q99623 299 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 DUSP15Q9H1R2 295 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 GPR173Q9NS66 373 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 B4GALT1P15291 398 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 MPLP40238 635 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 RNLSQ5VYX0 342 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF768Q9H5H4 540 aaKnown RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 GNB3P16520 340 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 NPY4RP50391 375 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 OXGR1Q96P68 337 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 A0A1B0GV50 99 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 SDCBPO00560 298 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 MSR1P21757 451 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 CCL11P51671 97 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 GSG1LQ6UXU4 331 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 PLPP5Q8NEB5 264 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 OR51A2Q8NGJ7 313 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 ZNRF4Q8WWF5 429 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 PRRT1Q99946 306 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 DEFB127Q9H1M4 99 aa11.86□□□□□ -0.51
HMGN1-216ENST00000486741 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
HMGN1-216ENST00000486741 POLEQ07864 2286 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 hCG_1807616A0A1W2PRN6 198 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 GNRHRP30968 328 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 CAPZA1P52907 286 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 UBE2NP61088 152 aaKnown RBP11.85□□□□□ -0.51
HMGN1-216ENST00000486741 C17orf107Q6ZR85 190 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF611Q8N823 705 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
HMGN1-216ENST00000486741 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 OGG1O15527 345 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 SGCEO43556 437 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 GMDSO60547 372 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 TMIGD3P0DMS9 266 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-216ENST00000486741 EDN3P14138 238 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 RPS4Y1P22090 263 aaKnown RBP11.85□□□□□ -0.51
HMGN1-216ENST00000486741 BCL2A1Q16548 175 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF546Q86UE3 836 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 AKR7LQ8NHP1 331 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 GON7Q9BXV9 100 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 TAS2R3Q9NYW6 316 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 FAM221AA4D161 298 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 OR4C16Q8NGL9 310 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 HAVCR1Q96D42 359 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF285Q96NJ3 590 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 C1QTNF6Q9BXI9 259 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 TWSG1Q9GZX9 223 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 ZMIZ1Q9ULJ6 1067 aa11.85□□□□□ -0.51
HMGN1-216ENST00000486741 KIF26BQ2KJY2 2108 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 ARGFXA6NJG6 315 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 SCO1O75880 301 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 FAHP16930 419 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 BTG1P62324 171 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 AIMP2Q13155 320 aaKnown RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 SLC38A9Q8NBW4 561 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF436Q9C0F3 470 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 NXF2Q9GZY0 626 aaKnown RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 UCK1Q9HA47 277 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 KCNN3Q9UGI6 736 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 M0R135 149 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 SPINK2P20155 84 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 GZMKP49863 264 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 MMP15P51511 669 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 CLDN15P56746 228 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 EXOSC6Q5RKV6 272 aaKnown RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 OGFOD3Q6PK18 319 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 PXKQ7Z7A4 578 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 DCUN1D4Q92564 292 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 ZNF799Q96GE5 643 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 ST6GALNAC2Q9UJ37 374 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 RAB22AQ9UL26 194 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 CCDC163A0A0D9SF12 145 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 A6NJ64 397 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 D6RAR5 112 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 SULT1B1O43704 296 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 TNFSF15O95150 251 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 FOXK1P85037 733 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 MFGE8Q08431 387 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-216ENST00000486741 RIN1Q13671 783 aa11.84□□□□□ -0.51
HMGN1-216ENST00000486741 OR52W1Q6IF63 320 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms