RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF547Q8IVP9 402 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 COX18Q8N8Q8 333 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 INO80EQ8NBZ0 244 aaPredicted RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 OR11H7Q8NGC8 314 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 OR10AD1Q8NGE0 317 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 COQ8AQ8NI60 647 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 PIFOQ8TCI5 191 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 TCEAL3Q969E4 200 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 ISG20Q96AZ6 181 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 COL21A1Q96P44 957 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 BLZF1Q9H2G9 400 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 PATZ1Q9HBE1 687 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 RPRD1BQ9NQG5 326 aaKnown RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 ZNRD1Q9P1U0 126 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 ZNF282Q9UDV7 671 aaPredicted RBP2.84□□□□□ -1.95
SMC4-218ENST00000486711 MTFP1Q9UDX5 166 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 TMEM14AQ9Y6G1 99 aa2.84□□□□□ -1.95
SMC4-218ENST00000486711 PLEKHG2Q9H7P9 1386 aa2.84□□□□□ -1.96
SMC4-218ENST00000486711 COL22A1Q8NFW1 1626 aaPredicted RBP2.83□□□□□ -1.96
SMC4-218ENST00000486711 GOLGA6L7A0A1B0GV03 622 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 H0YC42 278 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 PLPP1O14494 284 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 RAD51BO15315 384 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 XRCC2O43543 280 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 HSBP1O75506 76 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 SEMA3DO95025 777 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 VAMP5O95183 116 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 RAB4AP20338 218 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 CLDN8P56748 225 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 SYNJ2BPP57105 145 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 ZNF121P58317 390 aaPredicted RBP2.83□□□□□ -1.96
SMC4-218ENST00000486711 ESRRGP62508 458 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
SMC4-218ENST00000486711 IRF8Q02556 426 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 ZNF33AQ06730 810 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 SPAG1Q07617 926 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 DOC2AQ14183 400 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 KIR2DS1Q14954 304 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 SMUG1Q53HV7 270 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 PRMT9Q6P2P2 845 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 RIMKLAQ8IXN7 391 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 VKORC1L1Q8N0U8 176 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 C15orf56Q8N910 161 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 SYNPRQ8TBG9 265 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 CA5BP1Q8WTZ4 195 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 NRBF2Q96F24 287 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 MYOZ1Q9NP98 299 aaPredicted RBP2.83□□□□□ -1.96
SMC4-218ENST00000486711 MED4Q9NPJ6 270 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 MCUBQ9NWR8 336 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 PHLPP2Q6ZVD8 1323 aa2.83□□□□□ -1.96
SMC4-218ENST00000486711 ZNFX1Q9P2E3 1918 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 IGLV4-60A0A075B6I1 120 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 TRAV19A0A0A6YYK7 116 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 NVLO15381 856 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 OR56A5P0C7T3 313 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 ZNF32P17041 273 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 CD82P27701 267 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 RBM34P42696 430 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 GPR1P46091 355 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 DGCR6Q14129 220 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 EBI3Q14213 229 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 SNRNP35Q16560 246 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 FAM83EQ2M2I3 478 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 KLHL40Q2TBA0 621 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 AVPI1Q5T686 147 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 ZNF691Q5VV52 312 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 FBXW9Q5XUX1 488 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 ADNP2Q6IQ32 1131 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 CBLN2Q8IUK8 224 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 MYOCDQ8IZQ8 938 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 C15orf40Q8WUR7 153 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 RGP1Q92546 391 aaPredicted RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 APH1AQ96BI3 265 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 GPR21Q99679 349 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 HSD17B10Q99714 261 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 C12orf10Q9HB07 376 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 YARS2Q9Y2Z4 477 aaKnown RBP2.82□□□□□ -1.96
SMC4-218ENST00000486711 GAKO14976 1311 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 CAMTA1Q9Y6Y1 1673 aa2.82□□□□□ -1.96
SMC4-218ENST00000486711 IGKV2-28A0A075B6P5 120 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 TMEM223A0PJW6 202 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 H7C1H1 209 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 BET1O15155 118 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 IGKV2D-28P01615 120 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 CTSLP07711 333 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 USF1P22415 310 aaPredicted RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 MYL9P24844 172 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 RPS15AP62244 130 aaKnown RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 TFDP2Q14188 446 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 STK11Q15831 433 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 HIKESHIQ53FT3 197 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 RWDD4Q6NW29 188 aaKnown RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 UNC93AQ86WB7 457 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 NKAIN4Q8IVV8 208 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 LRRC75AQ8NAA5 344 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms