RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 KRT77Q7Z794 578 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 DMRTC2Q8IXT2 367 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 SNX33Q8WV41 574 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-229ENST00000486665 DACH2Q96NX9 599 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 ATF6BQ99941 703 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 CDCA4Q9BXL8 241 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 HDHD2Q9H0R4 259 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 CRIM1Q9NZV1 1036 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 IKZF2Q9UKS7 526 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 FBXL3Q9UKT7 428 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PRRC2AP48634 2157 aaKnown RBP11.06□□□□□ -0.64
HDAC6-229ENST00000486665 PRR14LQ5THK1 2151 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 C5orf49A4QMS7 147 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF878C9JN71 531 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 F5H5K5 113 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 MYL12AP19105 171 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 PAX7P23759 505 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 CALCRP30988 508 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 GDI2P50395 445 aaKnown RBP11.06□□□□□ -0.64
HDAC6-229ENST00000486665 GALK2Q01415 458 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 ECH1Q13011 328 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 DEGS2Q6QHC5 323 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-229ENST00000486665 SPARTQ8N0X7 666 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 NANOGP1Q8N7R0 232 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF485Q8NCK3 441 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 SLC30A7Q8NEW0 376 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-229ENST00000486665 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 C4orf36Q96KX1 117 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 KCNJ15Q99712 375 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 MROQ9BYG7 248 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF696Q9H7X3 374 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 CHCHD3Q9NX63 227 aaKnown RBP11.06□□□□□ -0.64
HDAC6-229ENST00000486665 GNG8Q9UK08 70 aa11.06□□□□□ -0.64
HDAC6-229ENST00000486665 C5orf63A6NC05 138 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 E9PI62 339 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 SIAH2O43255 324 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF254O75437 659 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 SULT1C4O75897 302 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
HDAC6-229ENST00000486665 TNFAIP8O95379 198 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 PNPP00491 289 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 PTHP01270 115 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 KRT8P05787 483 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ACSM4P0C7M7 580 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 EPXP11678 715 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF35P13682 527 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 CCNOP22674 350 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ANOS1P23352 680 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 CD40P25942 277 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 OTX1P32242 354 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-229ENST00000486665 APLNRP35414 380 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 PSMB10P40306 273 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 GRB2P62993 217 aaKnown RBP11.05□□□□□ -0.64
HDAC6-229ENST00000486665 LIPNQ5VXI9 398 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF773Q6PK81 442 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 RHOUQ7L0Q8 258 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 SSX8Q7RTT4 187 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 KLHL36Q8N4N3 616 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 GATAD2BQ8WXI9 593 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 PPP1R14AQ96A00 147 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 OR5M11Q96RB7 305 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 CAB39Q9Y376 341 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-229ENST00000486665 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
HDAC6-229ENST00000486665 IGHV2OR16-5A0A0B4J2B6 119 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 TMEM129A0AVI4 362 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 DEFB108AA8MXU0 73 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 MRPS14O60783 128 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SRSF10O75494 262 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 LALBAP00709 142 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 RPSAP08865 295 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SLC2A1P11166 492 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 HSD11B1P28845 292 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 WNT5AP41221 380 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 CX3CR1P49238 355 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 RIDAP52758 137 aaKnown RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 ART1P52961 327 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 TPTEP56180 551 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 NAAAQ02083 359 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 EMX1Q04741 257 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 BSPH1Q075Z2 132 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 MFGE8Q08431 387 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SPOCK1Q08629 439 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 TBC1D28Q2M2D7 210 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 TMPRSS11AQ6ZMR5 421 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 PRSS45Q7RTY3 260 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 KCTD20Q7Z5Y7 419 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 KLBQ86Z14 1044 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 SYS1Q8N2H4 156 aa11.04□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF283Q8N7M2 679 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms