RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 THRSPQ92748 146 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM230Q96A57 120 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 S100PBPQ96BU1 408 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 SLC25A44Q96H78 314 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 HHIPL1Q96JK4 782 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 YPEL4Q96NS1 127 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 SERINC2Q96SA4 455 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 RAB18Q9NP72 206 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-208ENST00000486641 DOK5Q9P104 306 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 DNAJB11Q9UBS4 358 aa9.54□□□□□ -0.88
CCDC171-208ENST00000486641 MPDZO75970 2070 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TBC1D3DA0A087WVF3 549 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TBC1D3LB9A6J9 549 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 UMAD1C9J7I0 102 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TAAR5O14804 337 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 B3GALT2O43825 422 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 CST4P01036 141 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 SMIM10L1P0DMW3 83 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TAS2R31P59538 309 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 PSG6Q00889 435 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MIDNQ504T8 468 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TBC1D3CQ6IPX1 549 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 FBXO42Q6P3S6 717 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 DGAT2L6Q6ZPD8 337 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MDGA2Q7Z553 956 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 FOXRED2Q8IWF2 684 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TBC1D3Q8IZP1 549 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF615Q8N8J6 731 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OR52R1Q8NGF1 315 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OR1J1Q8NGS3 322 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OTOSQ8NHW6 89 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OR8D1Q8WZ84 308 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 SMIM10Q96HG1 83 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ASB16Q96NS5 453 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OR8B4Q96RC9 309 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 RAB11FIP5Q9BXF6 653 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 SLC26A1Q9H2B4 701 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 C5orf66Q9H5L9 145 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 METTL8Q9H825 291 aaKnown RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ZDHHC4Q9NPG8 344 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 GSKIPQ9P0R6 139 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 GRHPRQ9UBQ7 328 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MAFFQ9ULX9 164 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 HIF3AQ9Y2N7 669 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 FLVCR1Q9Y5Y0 555 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM14AQ9Y6G1 99 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 FANCMQ8IYD8 2048 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 IGLON5A6NGN9 336 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 NUDT21O43809 227 aaKnown RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 NME2P1O60361 137 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 OR2C1O95371 312 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 SFT2D2O95562 160 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 CISD3P0C7P0 127 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ELNP15502 786 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 GNB3P16520 340 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 PI3P19957 117 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 S100A10P60903 97 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 RHEBQ15382 184 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ANKRD55Q3KP44 614 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 PNLDC1Q8NA58 520 aaKnown RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 CD300LFQ8TDQ1 290 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MR1Q95460 341 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TGM7Q96PF1 710 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TSPAN32Q96QS1 320 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 MBNL1Q9NR56 388 aaKnown RBP9.53□□□□□ -0.88
CCDC171-208ENST00000486641 B9D1Q9UPM9 204 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 HCFC2Q9Y5Z7 792 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 ALPK2Q86TB3 2170 aa9.53□□□□□ -0.88
CCDC171-208ENST00000486641 TRPM6Q9BX84 2022 aa9.52□□□□□ -0.88
CCDC171-208ENST00000486641 HSPB2A8KAH6 182 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 CCL16O15467 120 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 DDTP30046 118 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 NPY4RP50391 375 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 RPS23P62266 143 aaKnown RBP9.52□□□□□ -0.89
CCDC171-208ENST00000486641 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 IL15RAQ13261 267 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 SQSTM1Q13501 440 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 GAMTQ14353 236 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 SURF2Q15527 256 aaPredicted RBP9.52□□□□□ -0.89
CCDC171-208ENST00000486641 HSPB2Q16082 182 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 SSX2Q16385 188 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 ZNF74Q16587 644 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 TTLL10Q6ZVT0 673 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 PRSS41Q7RTY9 318 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 UBAC2Q8NBM4 344 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 POC1AQ8NBT0 407 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 OR9K2Q8NGE7 335 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 TERB2Q8NHR7 220 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 NT5CQ8TCD5 201 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 C2orf50Q96LR7 162 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 GNRHR2Q96P88 292 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 RBM14Q96PK6 669 aaKnown RBP9.52□□□□□ -0.89
CCDC171-208ENST00000486641 PRO1933Q9H354 126 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 GPR132Q9UNW8 380 aa9.52□□□□□ -0.89
CCDC171-208ENST00000486641 K7EQS6 105 aa9.51□□□□□ -0.89
CCDC171-208ENST00000486641 BCAT2O15382 392 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms