RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SGCAQ16586 387 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 DCAF10Q5QP82 559 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 C1orf100Q5SVJ3 147 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 PHF21AQ96BD5 680 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 FGGYQ96C11 551 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 IP6K3Q96PC2 410 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 HRASLSQ9HDD0 168 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 TRAV6A0A075B6T7 132 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 ANKRD20A5PA0PJZ0 165 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 C7orf66A4D0T2 115 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 DHHO43323 396 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 TRAPPC6AO75865 159 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 CD96P40200 585 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 SELENOPP49908 381 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 WIPI1Q5MNZ9 446 aaPredicted RBP17.99■□□□□ 0.47
HPS3-206ENST00000486530 BTN2A1Q7KYR7 527 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 ADGRE4PQ86SQ3 457 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 TCTE3Q8IZS6 198 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 JAGN1Q8N5M9 183 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 ZNF486Q96H40 463 aaPredicted RBP17.99■□□□□ 0.47
HPS3-206ENST00000486530 KLK11Q9UBX7 282 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 CGGBP1Q9UFW8 167 aaPredicted RBP17.99■□□□□ 0.47
HPS3-206ENST00000486530 CIB4A0PJX0 185 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 DCDC2BA2VCK2 349 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 PINLYPA6NC86 204 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 POU3F2P20265 443 aaPredicted RBP17.98■□□□□ 0.47
HPS3-206ENST00000486530 BDKRB2P30411 391 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 CX3CR1P49238 355 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 ZNF84P51523 738 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 CCR6P51684 374 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 PRKXP51817 358 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 ZNF121P58317 390 aaPredicted RBP17.98■□□□□ 0.47
HPS3-206ENST00000486530 CD83Q01151 205 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 FOXO1Q12778 655 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 OLFML2AQ68BL7 652 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 C20orf196Q8IYI0 205 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 OR2V1Q8NHB1 315 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 DEDD2Q8WXF8 326 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 NABP1Q96AH0 204 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 SCMH1Q96GD3 660 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 ADGRG7Q96K78 797 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 DMRTB1Q96MA1 342 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 SORCS2Q96PQ0 1159 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 FAM173AQ9BQD7 235 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 UTP23Q9BRU9 249 aaKnown RBP17.98■□□□□ 0.47
HPS3-206ENST00000486530 ULBP2Q9BZM5 246 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 ACTR6Q9GZN1 396 aa17.98■□□□□ 0.47
HPS3-206ENST00000486530 EP300Q09472 2414 aaPredicted RBP17.98■□□□□ 0.47
HPS3-206ENST00000486530 NCOA6Q14686 2063 aaPredicted RBP17.98■□□□□ 0.47
HPS3-206ENST00000486530 AHCTF1Q8WYP5 2266 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 A0A1B0GTI1 187 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 NEURL1O76050 574 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 F10P00742 488 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 GNALP38405 381 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ELFN2Q5R3F8 820 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 SPINK14Q6IE38 97 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 CDH24Q86UP0 819 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 LYPD6Q86Y78 171 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 GJC3Q8NFK1 279 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR8B12Q8NGG6 310 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR1J2Q8NGS2 313 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR51E1Q8TCB6 317 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 FYTTD1Q96QD9 318 aaKnown RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 KCNK15Q9H427 330 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ING3Q9NXR8 418 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 MRPL15Q9P015 296 aaKnown RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 A0A0A6YYJ9 748 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 LINC01387J3KSC0 135 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 H2AFB2P0C5Z0 115 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 PTHLHP12272 177 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 GABRA1P14867 456 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 CTSSP25774 331 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ITGA3P26006 1051 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 AIMP2Q13155 320 aaKnown RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 ENDOGQ14249 297 aaKnown RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 ABLIM2Q6H8Q1 611 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ZNF813Q6ZN06 617 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ZNF283Q8N7M2 679 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR1M1Q8NGA1 313 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR5D14Q8NGL3 314 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 OR56B4Q8NH76 319 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ADAT3Q96EY9 351 aaPredicted RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 RBM24Q9BX46 236 aaKnown RBP17.97■□□□□ 0.47
HPS3-206ENST00000486530 BEX2Q9BXY8 128 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 ATG5Q9H1Y0 275 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 TMEM138Q9NPI0 162 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 MCUBQ9NWR8 336 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 FLVCR1Q9Y5Y0 555 aa17.97■□□□□ 0.47
HPS3-206ENST00000486530 CXCL13O43927 109 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 GFRA1P56159 465 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 ZNF529Q6P280 563 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 ABHD12BQ7Z5M8 362 aaPredicted RBP17.96■□□□□ 0.47
HPS3-206ENST00000486530 BIVMQ86UB2 503 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 OR2M7Q8NG81 312 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 OR10D3Q8NH80 312 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 PTX4Q96A99 478 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 NKX3-1Q99801 234 aaPredicted RBP17.96■□□□□ 0.47
HPS3-206ENST00000486530 B4GALT7Q9UBV7 327 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 CUL9Q8IWT3 2517 aa17.96■□□□□ 0.47
HPS3-206ENST00000486530 ZNF716A6NP11 495 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms