RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CR1LQ2VPA4 569 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 LNX2Q8N448 690 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 OR51L1Q8NGJ5 315 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 OR51F2Q8NH61 342 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 CANT1Q8WVQ1 401 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 SPTSSAQ969W0 71 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 OTULINQ96BN8 352 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 GAL3ST1Q99999 423 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 HCAR1Q9BXC0 346 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 KIF17Q9P2E2 1029 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 WIPI2Q9Y4P8 454 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 CACNG2Q9Y698 323 aa10.95□□□□□ -0.66
CHMP3-208ENST00000486404 MSMBP08118 114 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 CD55P08174 381 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 PAICSP22234 425 aaKnown RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 FMO3P31513 532 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 GGT2P36268 569 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 SRP14P37108 136 aaKnown RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 TPTEP56180 551 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 MALLQ13021 153 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 HLXQ14774 488 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 SHQ1Q6PI26 577 aaKnown RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF771Q7L3S4 317 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 OR4Q3Q8NH05 313 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 PTP4A1Q93096 173 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 FEVQ99581 238 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 NIPSNAP1Q9BPW8 284 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 COPS4Q9BT78 406 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF665Q9H7R5 613 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 MRPL22Q9NWU5 206 aaKnown RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 PDP1Q9P0J1 537 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-208ENST00000486404 CYB5R1Q9UHQ9 305 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 COMMD3-BMI1R4GMX3 469 aa10.94□□□□□ -0.66
CHMP3-208ENST00000486404 M0R135 149 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 WNT9BO14905 357 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 LCATP04180 440 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 GYPBP06028 91 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 SELEP16581 610 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 SPI1P17947 270 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 POU1F1P28069 291 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 ENTPD1P49961 510 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 ERFP50548 548 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 BLVRAP53004 296 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 SLC25A1P53007 311 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 CBX1P83916 185 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 CDK5R2Q13319 367 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 TAF13Q15543 124 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 OR2T2Q6IF00 324 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 FBXW12Q6X9E4 464 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 MRPL21Q7Z2W9 205 aaKnown RBP10.93□□□□□ -0.66
CHMP3-208ENST00000486404 IQCF1Q8N6M8 205 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 ATG16L2Q8NAA4 619 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 BHLHE23Q8NDY6 225 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 OR10AD1Q8NGE0 317 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 HAVCR1Q96D42 359 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF799Q96GE5 643 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 C1orf159Q96HA4 380 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 RBM4Q9BWF3 364 aaKnown RBP10.93□□□□□ -0.66
CHMP3-208ENST00000486404 TEX12Q9BXU0 123 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 UBAP1Q9NZ09 502 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 TMEFF2Q9UIK5 374 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-208ENST00000486404 ATRQ13535 2644 aa10.93□□□□□ -0.66
CHMP3-208ENST00000486404 FAM157AC9JC47 383 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 FKBP6O75344 327 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 ACSM4P0C7M7 580 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 ANPEPP15144 967 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 GRK5P34947 590 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 RPS27P42677 84 aaKnown RBP10.92□□□□□ -0.66
CHMP3-208ENST00000486404 RASSF2P50749 326 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 SLC27A4Q6P1M0 643 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 LYPD4Q6UWN0 246 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 CD300LDQ6UXZ3 194 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 DCXRQ7Z4W1 244 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 OR13G1Q8NGZ3 307 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 ITLN1Q8WWA0 313 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 MAP6Q96JE9 813 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 OR2V2Q96R30 315 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 WDR76Q9H967 626 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 CMC2Q9NRP2 79 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 HIF1ANQ9NWT6 349 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 POMPQ9Y244 141 aa10.92□□□□□ -0.66
CHMP3-208ENST00000486404 TRAV20A0A0B4J274 112 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 RNF212BA8MTL3 300 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF878C9JN71 531 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 SRP9P49458 86 aaKnown RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 RAD23AP54725 363 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 LMO4P61968 165 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ACSM5Q6NUN0 579 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 Q6ZR03 302 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms