RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 RDH10Q8IZV5 341 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 TMEM106AQ96A25 262 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 NABP1Q96AH0 204 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 SH3GL3Q99963 347 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 SH3BGRL2Q9UJC5 107 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 HHLA2Q9UM44 414 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 NOSIPQ9Y314 301 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 LIPGQ9Y5X9 500 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 V9GYH0 126 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 OR6C65A6NJZ3 312 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 TBX1O43435 398 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 HPGDSO60760 199 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 CD2P06729 351 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 RNF224P0DH78 156 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 NTF4P34130 210 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 CA7P43166 264 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 PSMD7P51665 324 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 PSMA6P60900 246 aaKnown RBP12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 IFITM3Q01628 133 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 XKRXQ6PP77 449 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 FAM131AQ6UXB0 335 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 STAC2Q6ZMT1 411 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 LRRC28Q86X40 367 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 BCO1Q9HAY6 547 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 ABCB10Q9NRK6 738 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 FAM206AQ9NX38 181 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 DHDHQ9UQ10 334 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 ZNF835Q9Y2P0 537 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 V9GY05 133 aa12.83□□□□□ -0.36
POLR2J3-204ENST00000486319 ZNF724A8MTY0 619 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 CCL21O00585 134 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 RER1O15258 196 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 ZNHIT1O43257 154 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 IGHG3P01860 377 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 MAGEB1P43366 347 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 EVX1P49640 407 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 HIST1H3AP68431 136 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 STK11Q15831 433 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 C3AR1Q16581 482 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 SLC25A35Q3KQZ1 300 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 HIST2H3PS2Q5TEC6 136 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 HIST2H3AQ71DI3 136 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 OR10AC1Q8NH08 325 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 CHPT1Q8WUD6 406 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 HTRA1Q92743 480 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 WDYHV1Q96HA8 205 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 PNRC2Q9NPJ4 139 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 TINAGQ9UJW2 476 aa12.82□□□□□ -0.36
POLR2J3-204ENST00000486319 ARHGAP21Q5T5U3 1957 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 PRRG2O14669 202 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 CST2P09228 141 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SLC2A2P11168 524 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 ATF1P18846 271 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 CTSSP25774 331 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 CNIH2Q6PI25 160 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SYT9Q86SS6 491 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 LYSMD2Q8IV50 215 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 MCEMP1Q8IX19 187 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 ELMOD2Q8IZ81 293 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 ZNF433Q8N7K0 673 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 GDPD1Q8N9F7 314 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 MINDY2Q8NBR6 621 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 ASB5Q8WWX0 329 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 PPP1R14AQ96A00 147 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 ORAI1Q96D31 301 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 CMTM3Q96MX0 182 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 KCNJ15Q99712 375 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 FOXB1Q99853 325 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SRRQ9GZT4 340 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 PBOV1Q9GZY1 135 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 GPR35Q9HC97 309 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 NUFIP1Q9UHK0 495 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 FOXJ3Q9UPW0 622 aa12.81□□□□□ -0.36
POLR2J3-204ENST00000486319 A0A1B0GVG6 124 aa12.8□□□□□ -0.36
POLR2J3-204ENST00000486319 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms