RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CRMP1Q14194 572 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 DNAL1Q4LDG9 190 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 HIST2H3PS2Q5TEC6 136 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 FAHD2BQ6P2I3 314 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-204ENST00000486023 HIST2H3AQ71DI3 136 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 PEG10Q86TG7 708 aaKnown RBP14.97□□□□□ -0.01
COL6A1-204ENST00000486023 IQCF1Q8N6M8 205 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 OR2T33Q8NG76 320 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 APOBEC3DQ96AK3 386 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-204ENST00000486023 FAHD2AQ96GK7 314 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 FEVQ99581 238 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 GAL3ST1Q99999 423 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 ZNF665Q9H7R5 613 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 TUBG2Q9NRH3 451 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 CGGBP1Q9UFW8 167 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-204ENST00000486023 CYB5R1Q9UHQ9 305 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 MSMBP08118 114 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 SBK2P0C263 348 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 CLUP10909 449 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 KITLGP21583 273 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 FLOT2Q14254 428 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 TAF13Q15543 124 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 RSPO1Q2MKA7 263 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-204ENST00000486023 MALRD1Q5VYJ5 2156 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 Q6ZR03 302 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 SPATC1Q76KD6 591 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 LNX2Q8N448 690 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 ZNF511Q8NB15 262 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 OR10AD1Q8NGE0 317 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 OR6K6Q8NGW6 343 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 TEX47Q8TBZ9 253 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 POP5Q969H6 163 aaKnown RBP14.96□□□□□ -0.01
COL6A1-204ENST00000486023 TMEM186Q96B77 213 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 MAP6Q96JE9 813 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 ZNF582Q96NG8 517 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-204ENST00000486023 ATF6BQ99941 703 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 DGCR6LQ9BY27 220 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 CENPMQ9NSP4 180 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 DCAF16Q9NXF7 216 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 PDP1Q9P0J1 537 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-204ENST00000486023 CUBNO60494 3623 aa14.96□□□□□ -0.01
COL6A1-204ENST00000486023 AQP12BA6NM10 295 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 RIIAD1A6NNX1 92 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 PHF1O43189 567 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-204ENST00000486023 IFNGP01579 166 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 RAC2P15153 192 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 FMO3P31513 532 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 SLC6A9P48067 706 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 DVL1P1P54792 670 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-204ENST00000486023 TPTEP56180 551 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 SLC3A1Q07837 685 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 ECH1Q13011 328 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF362Q5T0B9 420 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-204ENST00000486023 ACSM5Q6NUN0 579 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 TMEM179BQ7Z7N9 219 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 AQP12AQ8IXF9 295 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 OR51F2Q8NH61 342 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 ITLN1Q8WWA0 313 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 SLCO4A1Q96BD0 722 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 C1orf159Q96HA4 380 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 OR2V2Q96R30 315 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 DDOQ99489 341 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 HCAR1Q9BXC0 346 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 MED20Q9H944 212 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 ATPIF1Q9UII2 106 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 BAIAP2Q9UQB8 552 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 COL6A5A8TX70 2615 aa14.95□□□□□ -0.02
COL6A1-204ENST00000486023 FAM183AA6NL82 134 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 H0YL77 283 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF593O00488 134 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-204ENST00000486023 DNAJC8O75937 253 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-204ENST00000486023 ACSM4P0C7M7 580 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 ANPEPP15144 967 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 TNFRSF1AP19438 455 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 PRKACGP22612 351 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 MALLQ13021 153 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 CXXC5Q7LFL8 322 aaKnown RBP14.94□□□□□ -0.02
COL6A1-204ENST00000486023 DCXRQ7Z4W1 244 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 HS3ST5Q8IZT8 346 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 SPTSSAQ969W0 71 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 RAB39BQ96DA2 213 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 RBM4Q9BWF3 364 aaKnown RBP14.94□□□□□ -0.02
COL6A1-204ENST00000486023 PCDHB10Q9UN67 800 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 PPP1R3CQ9UQK1 317 aa14.94□□□□□ -0.02
COL6A1-204ENST00000486023 SURF4O15260 269 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 CD55P08174 381 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 ADH4P08319 380 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF3P17036 446 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 SPI1P17947 270 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 PCMT1P22061 227 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 PRKXP51817 358 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 CBX1P83916 185 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 FBXW12Q6X9E4 464 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 OR8G5Q8NG78 346 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 OR13G1Q8NGZ3 307 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 SLC7A6OSQ96CW6 309 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-204ENST00000486023 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 OR51V1Q9H2C8 321 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF556Q9HAH1 456 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 PNRC2Q9NPJ4 139 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms