RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MAP2K4P45985 399 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 CX3CR1P49238 355 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 HGFACQ04756 655 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 SPARTQ8N0X7 666 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF283Q8N7M2 679 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 TSPAN14Q8NG11 270 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF799Q96GE5 643 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 SPOCK3Q9BQ16 436 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 MND1Q9BWT6 205 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 ACOXLQ9NUZ1 547 aa15.22■□□□□ 0.03
CHMP3-207ENST00000485465 RPP14O95059 124 aaKnown RBP15.21■□□□□ 0.03
CHMP3-207ENST00000485465 CALCRP30988 508 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 BSPH1Q075Z2 132 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 BEX5Q5H9J7 111 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 NCMAPQ5T1S8 102 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 DRAM2Q6UX65 266 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 NAA40Q86UY6 237 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 SVOPQ8N4V2 548 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF485Q8NCK3 441 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 GATAD2BQ8WXI9 593 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 PELI1Q96FA3 418 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 PLPPR2Q96GM1 343 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 C4orf45Q96LM5 186 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 DOK1Q99704 481 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 ESRP2Q9H6T0 727 aaKnown RBP15.21■□□□□ 0.03
CHMP3-207ENST00000485465 SLC24A3Q9HC58 644 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 GRIP1Q9Y3R0 1128 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 R4GMQ9 66 aa15.21■□□□□ 0.03
CHMP3-207ENST00000485465 A0A087WXM4 84 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 TMEM269A0A1B0GVZ9 245 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 SRSF10O75494 262 aaKnown RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 CRYAAP02489 173 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 PSMB10P40306 273 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 WNT5AP41221 380 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 SLC6A9P48067 706 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 GBX2P52951 348 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 WNT4P56705 351 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 ZNF121P58317 390 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 PSMA6P60900 246 aaKnown RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 EMX1Q04741 257 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 TBCEQ15813 527 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 ZNF829Q3KNS6 432 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 ARL9Q6T311 187 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 RORBQ92753 470 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 RNF166Q96A37 237 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 KCNS3Q9BQ31 491 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 ACOT13Q9NPJ3 140 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 FAM206AQ9NX38 181 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 BABAM2Q9NXR7 383 aa15.2■□□□□ 0.02
CHMP3-207ENST00000485465 EIF3KQ9UBQ5 218 aaKnown RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
CHMP3-207ENST00000485465 TENM4Q6N022 2769 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 MAGEA13PA6NCF6 341 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 ACOD1A6NK06 481 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 DEFB108AA8MXU0 73 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 SIAH2O43255 324 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 ICMTO60725 284 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 PNPP00491 289 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 LCATP04180 440 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 ANXA2P07355 339 aaKnown RBP15.19■□□□□ 0.02
CHMP3-207ENST00000485465 SLC2A1P11166 492 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 PCMT1P22061 227 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 PCSK6P29122 969 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 RGS6P49758 472 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 MMP16P51512 607 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 MFGE8Q08431 387 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-207ENST00000485465 SPOCK1Q08629 439 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 MRPL28Q13084 256 aaKnown RBP15.19■□□□□ 0.02
CHMP3-207ENST00000485465 DAZAP2Q15038 168 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-207ENST00000485465 SP5Q6BEB4 398 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-207ENST00000485465 COLCA1Q6ZS62 124 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 PRSS45Q7RTY3 260 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 KLBQ86Z14 1044 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 OR5M11Q96RB7 305 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 C1QTNF5Q9BXJ0 243 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 SP140LQ9H930 580 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 BRD7Q9NPI1 651 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 ADGRG4Q8IZF6 3080 aa15.19■□□□□ 0.02
CHMP3-207ENST00000485465 E9PI62 339 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 LOC110117498-PIK3R3F6TDL0 507 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 ABCD4O14678 606 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 CD3EP07766 207 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
CHMP3-207ENST00000485465 LOXP28300 417 aaPredicted RBP15.18■□□□□ 0.02
CHMP3-207ENST00000485465 NR1H2P55055 460 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 UCP2P55851 309 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 DOC2BQ14184 412 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 SPHARQ15513 63 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 MED22Q15528 200 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 FDX2Q6P4F2 183 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 FAM57BQ71RH2 274 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 TBCCD1Q9NVR7 557 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 KCNN3Q9UGI6 736 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 OR52A1Q9UKL2 312 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 N6AMT1Q9Y5N5 214 aa15.18■□□□□ 0.02
CHMP3-207ENST00000485465 SPTBN1Q01082 2364 aaKnown RBP15.17■□□□□ 0.02
CHMP3-207ENST00000485465 TRIM64CA6NLI5 447 aa15.17■□□□□ 0.02
CHMP3-207ENST00000485465 ATP6V1G2-DDX39BF2Z307 99 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms