RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	ZNF154	Q13106	437 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	KCNMB1	Q16558	191 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	MEP1B	Q16820	701 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	BTNL3	Q6UXE8	466 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	FBXW12	Q6X9E4	464 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	RNF148	Q8N7C7	305 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	BHLHE23	Q8NDY6	225 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	OR10AD1	Q8NGE0	317 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	PITX2	Q99697	317 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	OR52D1	Q9H346	318 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	GCM1	Q9NP62	436 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	TMEM100	Q9NV29	134 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	OPN4	Q9UHM6	478 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	MAGEL2	Q9UJ55	1249 aa		11.15	□□□□□ -0.62
UBA3-210	ENST00000485424	TMEM178B	H3BS89	294 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	IMPA2	O14732	288 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	GPANK1	O95872	356 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	TXNDC12	O95881	172 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	FABP3	P05413	133 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	FPR3	P25089	353 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	SLC6A9	P48067	706 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	ERF	P50548	548 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	MMP16	P51512	607 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	UBA52	P62987	128 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	ZMYND11	Q15326	602 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	SEC23B	Q15437	767 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	CORO6	Q6QEF8	472 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	NLRC3	Q7RTR2	1065 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	OR52L1	Q8NGH7	329 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	PYURF	Q96I23	114 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	MEGF10	Q96KG7	1140 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	NSMCE2	Q96MF7	247 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	TSSK2	Q96PF2	358 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	NMNAT3	Q96T66	252 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	RPRD1B	Q9NQG5	326 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	MMP26	Q9NRE1	261 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF446	Q9NWS9	450 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	MIOX	Q9UGB7	285 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	B9D1	Q9UPM9	204 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	INSIG2	Q9Y5U4	225 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	LHFPL6	Q9Y693	200 aa		11.14	□□□□□ -0.63
UBA3-210	ENST00000485424	CEACAM18	A8MTB9	384 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	IQCF6	A8MYZ5	107 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424		F5H5K5	113 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	CYB5R3	P00387	301 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	LCAT	P04180	440 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF823	P16415	610 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF12	P17014	697 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	CPT2	P23786	658 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	SEC61A1	P61619	476 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	MXRA7	P84157	204 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	FOXL1	Q12952	345 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	ECH1	Q13011	328 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	HNRNPA0	Q13151	305 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	RFX4	Q33E94	735 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	PRR31	Q5SQ13	230 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	TSEN54	Q7Z6J9	526 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	CPLX4	Q7Z7G2	160 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	MOGAT3	Q86VF5	341 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	LINC00346	Q8IVM7	164 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	SIGLECL1	Q8N7X8	197 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	OR8B3	Q8NGG8	313 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	OR52E2	Q8NGJ4	325 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	OR11L1	Q8NGX0	322 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	OR4K13	Q8NH42	304 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	GNPDA2	Q8TDQ7	276 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	DVL3	Q92997	716 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	NEIL1	Q96FI4	390 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	C7orf34	Q96L11	122 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	OR8B2	Q96RD0	313 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	SIGLEC11	Q96RL6	698 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	ATF6B	Q99941	703 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	GORASP2	Q9H8Y8	452 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	WDR76	Q9H967	626 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	ZMAT3	Q9HA38	289 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	NOP16	Q9Y3C1	178 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	PCDHGB1	Q9Y5G3	927 aa		11.13	□□□□□ -0.63
UBA3-210	ENST00000485424	IGHV3-64D	A0A0J9YX35	117 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424		A8MXK9	166 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424		F5H0A9	414 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424		F5H5P2	479 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424		H0YL77	283 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	TRAPPC2L	H3BP13	241 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	ARPC3	O15145	178 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	TMPRSS2	O15393	492 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	ZNF205	O95201	554 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	HIST1H1C	P16403	213 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	RRM2	P31350	389 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	RBMX	P38159	391 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	MTNR1A	P48039	350 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	TPTE	P56180	551 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	FXYD6P3	P58550	94 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	PRR20E	P86478	221 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	PRR20C	P86479	221 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	PRR20D	P86480	221 aa		11.12	□□□□□ -0.63
UBA3-210	ENST00000485424	PRR20B	P86481	221 aa		11.12	□□□□□ -0.63

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