RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 DCTDP32321 178 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 HTR5AP47898 357 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 CX3CR1P49238 355 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 MMP16P51512 607 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 CASP6P55212 293 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 ZNF121P58317 390 aaPredicted RBP12.66□□□□□ -0.38
LRIF1-202ENST00000485275 RAB1AP62820 205 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 GPR50Q13585 617 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 C1orf162Q8NEQ5 155 aaPredicted RBP12.66□□□□□ -0.38
LRIF1-202ENST00000485275 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 KCNJ15Q99712 375 aa12.66□□□□□ -0.38
LRIF1-202ENST00000485275 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
LRIF1-202ENST00000485275 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
LRIF1-202ENST00000485275 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 F5H5K5 113 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 AIREO43918 545 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 SC5DO75845 299 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 ATE1O95260 518 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 CCL2P13500 99 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 HSD11B1P28845 292 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 TMBIM6P55061 237 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 PCBD1P61457 104 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 VBP1P61758 197 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 GRB2P62993 217 aaKnown RBP12.65□□□□□ -0.38
LRIF1-202ENST00000485275 TGFBR3Q03167 851 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 SPCS2Q15005 226 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 P2RY6Q15077 328 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
LRIF1-202ENST00000485275 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
LRIF1-202ENST00000485275 CCDC120Q96HB5 630 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 HDHD5Q9BXW7 423 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 PIGMQ9H3S5 423 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 RNF121Q9H920 327 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 OR52A1Q9UKL2 312 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 STUB1Q9UNE7 303 aa12.65□□□□□ -0.38
LRIF1-202ENST00000485275 ESPL1Q14674 2120 aa12.65□□□□□ -0.39
LRIF1-202ENST00000485275 ARPC4-TTLL3A0A0A6YYG9 625 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 M0R135 149 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 UBL3O95164 117 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 TTRP02766 147 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 MRPL28Q13084 256 aaKnown RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 TAF13Q15543 124 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 FAM27D1Q5T7N8 215 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 PAQR4Q8N4S7 273 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 OR8B12Q8NGG6 310 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF420Q8TAQ5 688 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 RAB2BQ8WUD1 216 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF799Q96GE5 643 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 MYCBPQ99417 103 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 COQ7Q99807 217 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 KCNN2Q9H2S1 579 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 GALNT8Q9NY28 637 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 GTF2A1LQ9UNN4 478 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 SHISA3A0PJX4 238 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 TRIM64BA6NI03 449 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 GABRPO00591 440 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 AGFG2O95081 481 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 CD1AP06126 327 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ACSM4P0C7M7 580 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF14P17017 642 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 PCSK6P29122 969 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 CCR9P51686 369 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF829Q3KNS6 432 aaPredicted RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF843Q8N446 348 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 ZNF283Q8N7M2 679 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 NDNFQ8TB73 568 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 DGCR14Q96DF8 476 aaKnown RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 WACQ9BTA9 647 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 PBOV1Q9GZY1 135 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
LRIF1-202ENST00000485275 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
LRIF1-202ENST00000485275 OR5H1A6NKK0 313 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 PSMA1P25786 263 aaKnown RBP12.63□□□□□ -0.39
LRIF1-202ENST00000485275 C22orf42Q6IC83 251 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 FAM57BQ71RH2 274 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 C17orf78Q8N4C9 275 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 POM121L2Q96KW2 1035 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 NIPAL2Q9H841 368 aa12.63□□□□□ -0.39
LRIF1-202ENST00000485275 NUFIP1Q9UHK0 495 aaKnown RBP12.63□□□□□ -0.39
LRIF1-202ENST00000485275 N6AMT1Q9Y5N5 214 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms