RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 YIPF5Q969M3 257 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 SLAMF6Q96DU3 332 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 CENPNQ96H22 339 aaPredicted RBP13.84□□□□□ -0.19
DDR1-246ENST00000485023 DCLRE1CQ96SD1 692 aaKnown RBP13.84□□□□□ -0.19
DDR1-246ENST00000485023 INTS14Q96SY0 518 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 PKP2Q99959 881 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 COPS4Q9BT78 406 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 PURGQ9UJV8 347 aaKnown RBP13.84□□□□□ -0.19
DDR1-246ENST00000485023 N6AMT1Q9Y5N5 214 aa13.84□□□□□ -0.19
DDR1-246ENST00000485023 IGHV4-61A0A0C4DH41 118 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 VWC2LB2RUY7 222 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 H3BSA7 217 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 M0R135 149 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 IGHV1-46P01743 117 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 LCATP04180 440 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 USF1P22415 310 aaPredicted RBP13.83□□□□□ -0.2
DDR1-246ENST00000485023 EPHA2P29317 976 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 NAA10P41227 235 aaPredicted RBP13.83□□□□□ -0.2
DDR1-246ENST00000485023 RGS6P49758 472 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 BLVRAP53004 296 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 ECH1Q13011 328 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 HNRNPA0Q13151 305 aaKnown RBP13.83□□□□□ -0.2
DDR1-246ENST00000485023 TRIP10Q15642 601 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 DPY19L4Q7Z388 723 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 SPTSSAQ969W0 71 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 APOBEC3DQ96AK3 386 aaPredicted RBP13.83□□□□□ -0.2
DDR1-246ENST00000485023 ZNF799Q96GE5 643 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 CIB1Q99828 191 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 RIBC2Q9H4K1 309 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 NARFLQ9H6Q4 476 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 DECR2Q9NUI1 292 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 MTORP42345 2549 aa13.83□□□□□ -0.2
DDR1-246ENST00000485023 CR1P17927 2039 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 LRP5LA4QPB2 252 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 PRKYO43930 277 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 SLC2A1P11166 492 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 ANOS1P23352 680 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 PRKXP51817 358 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 TPTEP56180 551 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 ESRRGP62508 458 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 LOXL1Q08397 574 aaPredicted RBP13.82□□□□□ -0.2
DDR1-246ENST00000485023 APOFQ13790 326 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 PCGF3Q3KNV8 242 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 KRTAP21-3Q3LHN1 58 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 KRTAP27-1Q3LI81 207 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 OR2T2Q6IF00 324 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 USP51Q70EK9 711 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 BHLHE23Q8NDY6 225 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 OR5L1Q8NGL2 311 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 ST7LQ8TDW4 575 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 RDH5Q92781 318 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 COG8Q96MW5 612 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 RAB3IPQ96QF0 476 aaPredicted RBP13.82□□□□□ -0.2
DDR1-246ENST00000485023 AMELYQ99218 206 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 SAP30LQ9HAJ7 183 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 DDX28Q9NUL7 540 aaKnown RBP13.82□□□□□ -0.2
DDR1-246ENST00000485023 TMEFF2Q9UIK5 374 aaPredicted RBP13.82□□□□□ -0.2
DDR1-246ENST00000485023 CACNG2Q9Y698 323 aa13.82□□□□□ -0.2
DDR1-246ENST00000485023 C5orf63A6NC05 138 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 ZNF878C9JN71 531 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 PRODHO43272 600 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 MRPL3P09001 348 aaKnown RBP13.81□□□□□ -0.2
DDR1-246ENST00000485023 ZNF16P17020 682 aaPredicted RBP13.81□□□□□ -0.2
DDR1-246ENST00000485023 PCK2Q16822 640 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 SNAI3Q3KNW1 292 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 SPRNQ5BIV9 151 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 BCDIN3DQ7Z5W3 292 aaKnown RBP13.81□□□□□ -0.2
DDR1-246ENST00000485023 TIGD4Q8IY51 512 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 OR2Z1Q8NG97 314 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 HAVCR1Q96D42 359 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 ABHD6Q9BV23 337 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 C1QTNF5Q9BXJ0 243 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 CHODLQ9H9P2 273 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 CYSLTR2Q9NS75 346 aa13.81□□□□□ -0.2
DDR1-246ENST00000485023 ZNF275Q9NSD4 429 aaPredicted RBP13.81□□□□□ -0.2
DDR1-246ENST00000485023 IGHV1-69-2A0A0G2JMI3 117 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 INAFM1C9JVW0 142 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 J3QW42 95 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 PPIHO43447 177 aaKnown RBP13.8□□□□□ -0.2
DDR1-246ENST00000485023 KITLGP21583 273 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 ACHEP22303 614 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 SLC2A5P22732 501 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 GIFP27352 417 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 POLR2IP36954 125 aaKnown RBP13.8□□□□□ -0.2
DDR1-246ENST00000485023 RBMXP38159 391 aaKnown RBP13.8□□□□□ -0.2
DDR1-246ENST00000485023 GPR6P46095 362 aaPredicted RBP13.8□□□□□ -0.2
DDR1-246ENST00000485023 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 RIN1Q13671 783 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 ZMAT1Q5H9K5 638 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 TEX30Q5JUR7 227 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 AVPI1Q5T686 147 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 SLX4IPQ5VYV7 408 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 ZFP1Q6P2D0 407 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 Q6ZR03 302 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 ZNF283Q8N7M2 679 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 ZNF540Q8NDQ6 660 aa13.8□□□□□ -0.2
DDR1-246ENST00000485023 OR10AD1Q8NGE0 317 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms