RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 FMODQ06828 376 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 KRR1Q13601 381 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 ELFN2Q5R3F8 820 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 ACSM5Q6NUN0 579 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SHQ1Q6PI26 577 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 SMARCD3Q6STE5 483 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 FAM122BQ7Z309 247 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 WDFY1Q8IWB7 410 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 KLHL36Q8N4N3 616 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RFLNBQ8N5W9 214 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 GJC3Q8NFK1 279 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 OR52L1Q8NGH7 329 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 OR13C2Q8NGS9 318 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 FGFBP3Q8TAT2 258 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 KLF14Q8TD94 323 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RASD2Q96D21 266 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 MARS2Q96GW9 593 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RSRC1Q96IZ7 334 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 C7orf34Q96L11 122 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 RACGAP1Q9H0H5 632 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 HDHD2Q9H0R4 259 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 WNT5BQ9H1J7 359 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 IL1RAPQ9NPH3 570 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 PLEK2Q9NYT0 353 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 H2AFY2Q9P0M6 372 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 KCNG2Q9UJ96 466 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 POLR1DQ9Y2S0 133 aa5.25□□□□□ -1.57
PTCD3-215ENST00000484203 NOP16Q9Y3C1 178 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 FBN1P35555 2871 aaKnown RBP5.25□□□□□ -1.57
PTCD3-215ENST00000484203 DNHD1Q96M86 4753 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 LOC100509620A0A075B734 347 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 A0A0G2JMP0 313 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 A0A0X1KG70 313 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 LRP5LA4QPB2 252 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 J3KTA2 159 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 J3QLI3 93 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 CDC42EP2O14613 210 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 TIMM8AO60220 97 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR10H3O60404 316 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 DOK2O60496 412 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 RP2O75695 350 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 IGFBP1P08833 259 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 CCL2P13500 99 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 TCN1P20061 433 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 KITLGP21583 273 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 IGFBP5P24593 272 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 GPR4P46093 362 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OMPP47874 163 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 HTR5AP47898 357 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 CENPAP49450 140 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 HMGA2P52926 109 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 BLVRAP53004 296 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SEC24CP53992 1094 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SPIBQ01892 262 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 FHL1Q13642 323 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 MAD2L1BPQ15013 274 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 RFX4Q33E94 735 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 TBPL2Q6SJ96 375 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 USP51Q70EK9 711 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 PIGWQ7Z7B1 504 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 LRP11Q86VZ4 500 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 ZCCHC24Q8N2G6 241 aaKnown RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 PAQR4Q8N4S7 273 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SPICQ8N5J4 248 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR4M2Q8NGB6 313 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR4C15Q8NGM1 316 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR2AJ1Q8NGZ0 328 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR1F12Q8NHA8 337 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 AKR7LQ8NHP1 331 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 FANK1Q8TC84 345 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 ZFAND2BQ8WV99 257 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 PTP4A1Q93096 173 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 APOBEC3DQ96AK3 386 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 TMEM186Q96B77 213 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 C20orf173Q96LM9 149 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SAMD8Q96LT4 415 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 Q96M85 177 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 CDRT15Q96T59 188 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 COQ7Q99807 217 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 TRIM15Q9C019 465 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 OR2J1Q9GZK6 312 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SLC22A4Q9H015 551 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 SYT4Q9H2B2 425 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 ZNF275Q9NSD4 429 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-215ENST00000484203 HIF1ANQ9NWT6 349 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 ACTR3BQ9P1U1 418 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 CD300AQ9UGN4 299 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 FZR1Q9UM11 496 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 ADAM18Q9Y3Q7 739 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 IER3IP1Q9Y5U9 82 aa5.24□□□□□ -1.57
PTCD3-215ENST00000484203 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.24□□□□□ -1.571e-7■■■□□ 17.5
PTCD3-215ENST00000484203 PPIAL4EA0A075B759 164 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 IGKV1D-43A0A0B4J1Z2 117 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 PPIAL4CA0A0B4J2A2 164 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 TRBV4-1A0A0J9YWV2 114 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 LRRC30A6NM36 301 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 PPIAL4DF5H284 164 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 ARPC2O15144 300 aa5.23□□□□□ -1.57
PTCD3-215ENST00000484203 PHF1O43189 567 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms