RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OR1F12Q8NHA8 337 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 SYNPRQ8TBG9 265 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 LRTOMTQ8WZ04 291 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 GCDHQ92947 438 aaPredicted RBP8.54□□□□□ -1.04
CPSF4-213ENST00000484112 PLEKHA8Q96JA3 519 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 RBM4BQ9BQ04 359 aaKnown RBP8.54□□□□□ -1.04
CPSF4-213ENST00000484112 KRT84Q9NSB2 600 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 LHFPL6Q9Y693 200 aa8.54□□□□□ -1.04
CPSF4-213ENST00000484112 ANK2Q01484 3957 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 B4DSR2 109 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 GLCEO94923 617 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MPZL1O95297 269 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ABHD16AO95870 558 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 IGFBP1P08833 259 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 FAM157BP0CG42 384 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 CCL2P13500 99 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 CCNOP22674 350 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 POU1F1P28069 291 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 GCH1P30793 250 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ENTPD1P49961 510 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ERFP50548 548 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MRPS11P82912 194 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 RIN1Q13671 783 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 KPNB1Q14974 876 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 PTGES3Q15185 160 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 PCGF3Q3KNV8 242 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 KRTAP27-1Q3LI81 207 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 CCDC92Q53HC0 331 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ZMAT1Q5H9K5 638 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ACSM5Q6NUN0 579 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 SHFQ7M4L6 423 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 CYB561A3Q8NBI2 242 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 SNX33Q8WV41 574 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 APOBEC3DQ96AK3 386 aaPredicted RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MARS2Q96GW9 593 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 DIRC2Q96SL1 478 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 ATF6BQ99941 703 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MRPL37Q9BZE1 423 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MARCH7Q9H992 704 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 DDX28Q9NUL7 540 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 HIF1ANQ9NWT6 349 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 MRPL22Q9NWU5 206 aaKnown RBP8.53□□□□□ -1.04
CPSF4-213ENST00000484112 NKIRAS2Q9NYR9 191 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 COMMD3-BMI1R4GMX3 469 aa8.53□□□□□ -1.04
CPSF4-213ENST00000484112 A0A0A6YYJ9 748 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 A0A1W2PPW3 197 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 RER1O15258 196 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 APOC1P02654 83 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 WNT5AP41221 380 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 PPP1CBP62140 327 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 LINC01590Q5TEZ4 76 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF101Q8IZC7 436 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 SEMA6DQ8NFY4 1073 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 SGMS2Q8NHU3 365 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ABHD4Q8TB40 342 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ZFAND2BQ8WV99 257 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 PTP4A1Q93096 173 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 SPTSSAQ969W0 71 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ZMYND19Q96E35 227 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-213ENST00000484112 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 PITX2Q99697 317 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 GABARAPL3Q9BY60 117 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 TOR3AQ9H497 397 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 USE1Q9NZ43 259 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 DUSP13Q9UII6 198 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 OAZ3Q9UMX2 235 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 GRIP1Q9Y3R0 1128 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 DYSFO75923 2080 aa8.52□□□□□ -1.05
CPSF4-213ENST00000484112 PLSCR5A0PG75 271 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 ZAR1LA6NP61 321 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 FAM157AC9JC47 383 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 H3BNX3 289 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 TRIM77I1YAP6 450 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF593O00488 134 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 ADH4P08319 380 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 RAC2P15153 192 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 COL8A2P25067 703 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 GSTT1P30711 240 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 OTX1P32242 354 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 PYCR1P32322 319 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SLC15A1P46059 708 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 GPR6P46095 362 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 TPTEP56180 551 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 GRB2P62993 217 aaKnown RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SNAPC1Q16533 368 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 MEP1BQ16820 701 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 NKPD1Q17RQ9 610 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 LCN1P1Q5VSP4 162 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SLX4IPQ5VYV7 408 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 DRAM2Q6UX65 266 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 COLCA1Q6ZS62 124 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 AMIGO2Q86SJ2 522 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms