RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 OR1J1Q8NGS3 322 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 OR1F12Q8NHA8 337 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 SYNPRQ8TBG9 265 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 STMN2Q93045 179 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 PTP4A1Q93096 173 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 PPP1R14AQ96A00 147 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 C4orf45Q96LM5 186 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 DCLRE1CQ96SD1 692 aaKnown RBP7.66□□□□□ -1.18
COL8A1-207ENST00000483969 DOK1Q99704 481 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 PKP2Q99959 881 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 RBM4BQ9BQ04 359 aaKnown RBP7.66□□□□□ -1.18
COL8A1-207ENST00000483969 NMNAT2Q9BZQ4 307 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 GABARAPL1Q9H0R8 117 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 RAB1BQ9H0U4 201 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 MS4A5Q9H3V2 200 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 FN3KQ9H479 309 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 SLC25A19Q9HC21 320 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 S100A14Q9HCY8 104 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 TVP23BQ9NYZ1 205 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 ATPIF1Q9UII2 106 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 OAZ3Q9UMX2 235 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 ORC6Q9Y5N6 252 aa7.66□□□□□ -1.18
COL8A1-207ENST00000483969 LOC100509620A0A075B734 347 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 OR6C6A6NF89 314 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 SAC3D1A6NKF1 404 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 H3BNX3 289 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 H7C417 338 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 ZNF593O00488 134 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 RER1O15258 196 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 SURF4O15260 269 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 DOK2O60496 412 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 GLCEO94923 617 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 GPANK1O95872 356 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 IGFBP5P24593 272 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 GCH1P30793 250 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 RGS6P49758 472 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 ADAM8P78325 824 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 ZSCAN26Q16670 478 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 MEP1BQ16820 701 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 ZNF718Q3SXZ3 478 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 CCDC92Q53HC0 331 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 TEX30Q5JUR7 227 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 SLC35D3Q5M8T2 416 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 Q5PR19 223 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 ELFN2Q5R3F8 820 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 TMEM236Q5W0B7 351 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 TGIF2LYQ8IUE0 185 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 PAQR4Q8N4S7 273 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 OR51L1Q8NGJ5 315 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 OR5L1Q8NGL2 311 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 OR9Q1Q8NGQ5 310 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 MRPL24Q96A35 216 aaKnown RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 COG8Q96MW5 612 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 PITX2Q99697 317 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 COQ7Q99807 217 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 VRK1Q99986 396 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 HDHD2Q9H0R4 259 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 OR51V1Q9H2C8 321 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 TBCCD1Q9NVR7 557 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 SLCO1C1Q9NYB5 712 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 H2AFY2Q9P0M6 372 aaPredicted RBP7.65□□□□□ -1.18
COL8A1-207ENST00000483969 CYB5R1Q9UHQ9 305 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 GRIP1Q9Y3R0 1128 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 LHFPL6Q9Y693 200 aa7.65□□□□□ -1.18
COL8A1-207ENST00000483969 FBN2P35556 2912 aa7.65□□□□□ -1.19
COL8A1-207ENST00000483969 CACNA1CQ13936 2221 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 TMEM129A0AVI4 362 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 TVP23AA6NH52 213 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 FAM183AA6NL82 134 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 PRODHO43272 600 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 SYNGR3O43761 229 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 GPRIN2O60269 458 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 BAG2O95816 211 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 ABHD16AO95870 558 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 FSHBP01225 129 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 MT-ND5P03915 603 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 GYPBP06028 91 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 ZNF250P15622 560 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 GGT2P36268 569 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 ENTPD1P49961 510 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 PPOXP50336 477 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 EFNA4P52798 201 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 RAD23AP54725 363 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 TPTEP56180 551 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 KLF3P57682 345 aaPredicted RBP7.64□□□□□ -1.19
COL8A1-207ENST00000483969 DSCR9P59020 149 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 TAF13Q15543 124 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 KLHL12Q53G59 568 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 OTPQ5XKR4 325 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 SLC18B1Q6NT16 456 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 PLBD1Q6P4A8 553 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 CORO6Q6QEF8 472 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 CXXC5Q7LFL8 322 aaKnown RBP7.64□□□□□ -1.19
COL8A1-207ENST00000483969 SHFQ7M4L6 423 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 CPOQ8IVL8 374 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 OR6K6Q8NGW6 343 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 ZNRF4Q8WWF5 429 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 NEU4Q8WWR8 484 aaPredicted RBP7.64□□□□□ -1.19
COL8A1-207ENST00000483969 SPTSSAQ969W0 71 aa7.64□□□□□ -1.19
COL8A1-207ENST00000483969 C9orf16Q9BUW7 83 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms