RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OR51A2Q8NGJ7 313 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 OR6M1Q8NGM8 313 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 TMEM45BQ96B21 275 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 FAM3DQ96BQ1 224 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF845Q96IR2 970 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-225ENST00000483495 PRRX2Q99811 253 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 C7orf50Q9BRJ6 194 aaKnown RBP11.67□□□□□ -0.54
CPNE1-225ENST00000483495 NLKQ9UBE8 527 aa11.67□□□□□ -0.54
CPNE1-225ENST00000483495 RBMX2Q9Y388 322 aaKnown RBP11.67□□□□□ -0.54
CPNE1-225ENST00000483495 A0A0B4J293 547 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ARGFXA6NJG6 315 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 XRCC3O43542 346 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 OTX1P32242 354 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 RFC3P40938 356 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 MAGEA5P43359 124 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 CX3CR1P49238 355 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 PRKXP51817 358 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 TPTEP56180 551 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 PLA2G7Q13093 441 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 DYRK1AQ13627 763 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 C2orf76Q3KRA6 126 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 CCDC92Q53HC0 331 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 TMEM69Q5SWH9 247 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 GALNTL5Q7Z4T8 443 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 OR1J2Q8NGS2 313 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 HAS2Q92819 552 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 CREB3L1Q96BA8 519 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 UPRTQ96BW1 309 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 FGGYQ96C11 551 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 FOXRED1Q96CU9 486 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 RHBDD3Q9Y3P4 386 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 A0A1B0GVI7 797 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 CTAG2O75638 210 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 IGLV3-1P01715 115 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 HTR2CP28335 458 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 MEOX1P50221 254 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 TAS2R20P59543 309 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 BCL2A1Q16548 175 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF813Q6ZN06 617 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 KRT74Q7RTS7 529 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 LUZP2Q86TE4 346 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 GLCCI1Q86VQ1 547 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 SIAH3Q8IW03 269 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 GPR137CQ8N3F9 429 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 OR51E1Q8TCB6 317 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ADAT3Q96EY9 351 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-225ENST00000483495 SCMH1Q96GD3 660 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF319Q9P2F9 582 aa11.66□□□□□ -0.54
CPNE1-225ENST00000483495 FREM2Q5SZK8 3169 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 CENPXA8MT69 81 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 FAM166BA8MTA8 275 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 LDLRAD4O15165 306 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 ORC5O43913 435 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 CST2P09228 141 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 TMIGD3P0DMS9 266 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-225ENST00000483495 CD46P15529 392 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 GDNFP39905 211 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
CPNE1-225ENST00000483495 EFNB2P52799 333 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 CAPZA1P52907 286 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 PLGLB1Q02325 96 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 SPOCK1Q08629 439 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 GLYATL3Q5SZD4 288 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 RSBN1Q5VWQ0 802 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-225ENST00000483495 ZNF283Q8N7M2 679 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 ABHD3Q8WU67 409 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 FBXO17Q96EF6 278 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 SLC6A15Q9H2J7 730 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 CRLF2Q9HC73 371 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 ACKR4Q9NPB9 350 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
CPNE1-225ENST00000483495 PAQR5Q9NXK6 330 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-225ENST00000483495 TMEM272A0A1B0GTI8 110 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 CIB4A0PJX0 185 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 GGT3PA6NGU5 568 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 HMX3A6NHT5 357 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 ACOT7O00154 380 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 KRT33AO76009 404 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 SLC2A1P11166 492 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 HLA-DMAP28067 261 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 BDKRB2P30411 391 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 BTG1P62324 171 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 RSPO1Q2MKA7 263 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-225ENST00000483495 LRRC18Q8N456 261 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 MEIOBQ8N635 442 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 OR1M1Q8NGA1 313 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 OR5D14Q8NGL3 314 aa11.64□□□□□ -0.55
CPNE1-225ENST00000483495 OR52I2Q8NH67 350 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms