RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 DDOQ99489 341 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 FEVQ99581 238 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 ATF6BQ99941 703 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 SOX7Q9BT81 388 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 ARMC1Q9NVT9 282 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 MRPL22Q9NWU5 206 aaKnown RBP11.8□□□□□ -0.52
VARS-225ENST00000482996 PTTG3PQ9NZH4 202 aa11.8□□□□□ -0.52
VARS-225ENST00000482996 B4DSR2 109 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 F5H5K5 113 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 H3BN98 237 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 SURF4O15260 269 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 CD55P08174 381 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 ZNF3P17036 446 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 FMO3P31513 532 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 GGT2P36268 569 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 SLC25A1P53007 311 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 MVKQ03426 396 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 CRMP1Q14194 572 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 ZNF362Q5T0B9 420 aaPredicted RBP11.79□□□□□ -0.52
VARS-225ENST00000482996 AVPI1Q5T686 147 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 FBXW12Q6X9E4 464 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 OR9Q1Q8NGQ5 310 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 OR4Q3Q8NH05 313 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 CCL17Q92583 94 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 SPTSSAQ969W0 71 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 NIPSNAP1Q9BPW8 284 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 RBM4Q9BWF3 364 aaKnown RBP11.79□□□□□ -0.52
VARS-225ENST00000482996 ZNF556Q9HAH1 456 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 TREM2Q9NZC2 230 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 PDP1Q9P0J1 537 aaPredicted RBP11.79□□□□□ -0.52
VARS-225ENST00000482996 POMPQ9Y244 141 aa11.79□□□□□ -0.52
VARS-225ENST00000482996 MXRA5Q9NR99 2828 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 TCRBV3S1A0A5B6 114 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 TVP23AA6NH52 213 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 ACSM4P0C7M7 580 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 SELEP16581 610 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 SRD5A1P18405 259 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 BLVRAP53004 296 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 DVL1P1P54792 670 aaPredicted RBP11.78□□□□□ -0.52
VARS-225ENST00000482996 TPTEP56180 551 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 HLXQ14774 488 aaPredicted RBP11.78□□□□□ -0.52
VARS-225ENST00000482996 CR1LQ2VPA4 569 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
VARS-225ENST00000482996 GLCCI1Q86VQ1 547 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 OR2Z1Q8NG97 314 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 RAB39BQ96DA2 213 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 HCAR1Q9BXC0 346 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 C1QTNF5Q9BXJ0 243 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 CMC2Q9NRP2 79 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
VARS-225ENST00000482996 WNT9BO14905 357 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 FKBP6O75344 327 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 LCATP04180 440 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 ANPEPP15144 967 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 SPI1P17947 270 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 PAICSP22234 425 aaKnown RBP11.77□□□□□ -0.53
VARS-225ENST00000482996 POU1F1P28069 291 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 GRK5P34947 590 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 ENTPD1P49961 510 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 LMO4P61968 165 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 MALLQ13021 153 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
VARS-225ENST00000482996 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 OR2T2Q6IF00 324 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 SLC27A4Q6P1M0 643 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 COLCA1Q6ZS62 124 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 OR5AS1Q8N127 324 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 OR6K6Q8NGW6 343 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 OR51F2Q8NH61 342 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.53
VARS-225ENST00000482996 NMNAT2Q9BZQ4 307 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 PNRC2Q9NPJ4 139 aaKnown RBP11.77□□□□□ -0.53
VARS-225ENST00000482996 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 IL19Q9UHD0 177 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 TMEFF2Q9UIK5 374 aaPredicted RBP11.77□□□□□ -0.53
VARS-225ENST00000482996 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
VARS-225ENST00000482996 ISPDA4D126 451 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 M0R135 149 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 GYPBP06028 91 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 MSMBP08118 114 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 SPARCP09486 303 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 ANXA8P13928 327 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 SLC6A9P48067 706 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 ERFP50548 548 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 TAF13Q15543 124 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 Q6ZR03 302 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 DCXRQ7Z4W1 244 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 TMEM179BQ7Z7N9 219 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 IQCF1Q8N6M8 205 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 PAPD5Q8NDF8 572 aaKnown RBP11.76□□□□□ -0.53
VARS-225ENST00000482996 OR8G5Q8NG78 346 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms