RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HCAR1Q9BXC0 346 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 RPRD1BQ9NQG5 326 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 TMEM100Q9NV29 134 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 NDE1Q9NXR1 346 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 OPN4Q9UHM6 478 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 AUP1Q9Y679 476 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 LHFPL6Q9Y693 200 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
CTDSP1-208ENST00000482272 F5H5K5 113 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 KRT36O76013 467 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 ANOS1P23352 680 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 RRM2P31350 389 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 COMPP49747 757 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNF154Q13106 437 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 ZMYND11Q15326 602 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 C16orf89Q6UX73 402 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 ZBTB46Q86UZ6 589 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 C3orf56Q8N813 242 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 MEGF10Q96KG7 1140 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 PITX2Q99697 317 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 ATF6BQ99941 703 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 DDX28Q9NUL7 540 aaKnown RBP11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 TAGLN3Q9UI15 199 aa11.31□□□□□ -0.6
CTDSP1-208ENST00000482272 LRRC30A6NM36 301 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 IQCF6A8MYZ5 107 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 TRAPPC2LH3BP13 241 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ARPC2O15144 300 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 WNT2P09544 360 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 PSKH1P11801 424 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNF823P16415 610 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNF12P17014 697 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 GSSP48637 474 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 MMP16P51512 607 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 PRSS12P56730 875 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 MXRA7P84157 204 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 TSPAN31Q12999 210 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 MALLQ13021 153 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 RSPO1Q2MKA7 263 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 SPATS1Q496A3 300 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ARMCX4Q5H9R4 360 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 RPL13AP3Q6NVV1 102 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ZDHHC21Q8IVQ6 265 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 OR10AD1Q8NGE0 317 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 OR52E2Q8NGJ4 325 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNF420Q8TAQ5 688 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 FN3KQ9H479 309 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 TMEM165Q9HC07 324 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 OR5V1Q9UGF6 321 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 NUP50Q9UKX7 468 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 LRCH1Q9Y2L9 728 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 INSIG2Q9Y5U4 225 aa11.3□□□□□ -0.6
CTDSP1-208ENST00000482272 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 A8MXK9 166 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 F5H0A9 414 aaPredicted RBP11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 H0YL77 283 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 FSHBP01225 129 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 LCATP04180 440 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 IRF2P14316 349 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 HMGA2P52926 109 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 TPTEP56180 551 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 SEC61A1P61619 476 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNF181Q2M3W8 571 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 SLC18B1Q6NT16 456 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 BHLHE23Q8NDY6 225 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 SDR9C7Q8NEX9 313 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 OR52L1Q8NGH7 329 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 ZNRF4Q8WWF5 429 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 PLEKHA8Q96JA3 519 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 WDR76Q9H967 626 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 CYB5R1Q9UHQ9 305 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 ARL2BPQ9Y2Y0 163 aa11.29□□□□□ -0.6
CTDSP1-208ENST00000482272 CEACAM18A8MTB9 384 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 F5H5P2 479 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 MLNRO43193 412 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 DCTN3O75935 186 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 FSTL3O95633 263 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 CYB5R3P00387 301 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
CTDSP1-208ENST00000482272 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms