RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 STEAP3Q658P3 488 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 RGS7BPQ6MZT1 257 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SCCPDHQ8NBX0 429 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 OR5M1Q8NGP8 315 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 PP6455Q8WZ26 134 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SLCO4A1Q96BD0 722 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 RBMXL1Q96E39 390 aaKnown RBP8.58□□□□□ -1.04
GARNL3-216ENST00000481242 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SHARPINQ9H0F6 387 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF225Q9UK10 706 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 R4GMQ9 66 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ECM29Q5VYK3 1845 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SEC16AO15027 2179 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 CDK5RAP2Q96SN8 1893 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 IGHV5-51A0A0C4DH38 117 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF98A6NK75 572 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 F6UZH7 168 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 BHLHE40O14503 412 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 PMS2P2O95744 297 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 GALNSP34059 522 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 CCR9P51686 369 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF266Q14584 549 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 LTC4SQ16873 150 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ELFN2Q5R3F8 820 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SFRP5Q5T4F7 317 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 SKA3Q8IX90 412 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 GALNT16Q8N428 558 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 OR51F2Q8NH61 342 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 MALSU1Q96EH3 234 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 DAZAP1Q96EP5 407 aaKnown RBP8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF649Q9BS31 505 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF355PQ9NSJ1 428 aa8.58□□□□□ -1.04
GARNL3-216ENST00000481242 C5orf49A4QMS7 147 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HPP00738 406 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 MT-ND4P03905 459 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PMPCAQ10713 525 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HES1Q14469 280 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 SMIM21Q3B7S5 101 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 MDGA2Q7Z553 956 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF546Q86UE3 836 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ADGRG3Q86Y34 549 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 RIMKLAQ8IXN7 391 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 APOBEC4Q8WW27 367 aaKnown RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HES7Q9BYE0 225 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HEYLQ9NQ87 328 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PCOLCE2Q9UKZ9 415 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 LAMP3Q9UQV4 416 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 SLCO1B1Q9Y6L6 691 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 DFFBO76075 338 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 GUSBP08236 651 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PNLIPP16233 465 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 GLRA1P23415 457 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 RFX2P48378 723 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 GZMKP49863 264 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 RAC1P63000 192 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 EDDM3AQ14507 147 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ELP2Q6IA86 826 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 KIRREL2Q6UWL6 708 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 OLIG3Q7RTU3 272 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 Q8IYB0 196 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ZDHHC23Q8IYP9 409 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 CMTM4Q8IZR5 234 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 OR5T1Q8NG75 326 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 OR6K3Q8NGY3 331 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 OR2AE1Q8NHA4 323 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 M1APQ8TC57 530 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HAS2Q92819 552 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF385DQ9H6B1 395 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 LHX9Q9NQ69 397 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 SMCO4Q9NRQ5 59 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 TRABD2BA6NFA1 517 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 KIR2DL1P43626 348 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HNF4GQ14541 408 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ZBTB37Q5TC79 503 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 NRARPQ7Z6K4 114 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 BHLHE23Q8NDY6 225 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PLPP5Q8NEB5 264 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 AP1S3Q96PC3 154 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 FOXB1Q99853 325 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 RBM38Q9H0Z9 239 aaKnown RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 FAM212BQ9NTI7 297 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF816-ZNF321PA0A0X1KG74 233 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 M0R1B8 84 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 PRR35P0CG20 571 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 FOLR1P15328 257 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 RPS19P39019 145 aaKnown RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 LUMP51884 338 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 CLDN12P56749 244 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 SLC17A1Q14916 467 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 NKG7Q16617 165 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 LBHQ53QV2 105 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-216ENST00000481242 HIST2H3PS2Q5TEC6 136 aa8.57□□□□□ -1.04
GARNL3-216ENST00000481242 AADACL4Q5VUY2 407 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms