RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GAL3ST4Q96RP7 486 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 MRPS33Q9Y291 106 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 CSAG2Q9Y5P2 127 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 PRSS44E7EML9 344 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ERCC1P07992 297 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 HPGDP15428 266 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 TACR3P29371 465 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 CAPZBP47756 277 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ADAM8P78325 824 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 C10orf91Q5T1B1 145 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF704Q6ZNC4 412 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 MARCH3Q86UD3 253 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ABCA7Q8IZY2 2146 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 OR4D6Q8NGJ1 314 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 NUDCD2Q8WVJ2 157 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 SLC25A44Q96H78 314 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 TREM1Q9NP99 234 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ACKR4Q9NPB9 350 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 LANCL2Q9NS86 450 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 PRR13Q9NZ81 148 aa11.91□□□□□ -0.5
PDZRN3-208ENST00000479530 ICOSLGO75144 302 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 IFI6P09912 130 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CD79AP11912 226 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 FJX1Q86VR8 437 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 TMEM200AQ86VY9 491 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 SPAG16Q8N0X2 631 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 SMRP1Q8NCR6 262 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 FAM46BQ96A09 425 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 INTS12Q96CB8 462 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 TCTN2Q96GX1 697 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 TMEM14AQ9Y6G1 99 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 PCNX3Q9H6A9 2034 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 MSGN1A6NI15 193 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 H0YIZ8 118 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 MPZL1O95297 269 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 RENP00797 406 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CCR5P51681 352 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 PDZK1IP1Q13113 114 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 MST1LQ2TV78 715 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 TEX30Q5JUR7 227 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 NKAPLQ5M9Q1 402 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 ADGRE4PQ86SQ3 457 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 ZNF679Q8IYX0 411 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 OR1M1Q8NGA1 313 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 OR4K17Q8NGC6 315 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 RNF128Q8TEB7 428 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 SFT2D1Q8WV19 159 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 LIPHQ8WWY8 451 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 DCUN1D4Q92564 292 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 FOXRED1Q96CU9 486 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CRB3Q9BUF7 120 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 UBQLN4Q9NRR5 601 aa11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-208ENST00000479530 C5orf51A6NDU8 294 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF705EA8MWA4 302 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 FARS2O95363 451 aaKnown RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 IL2RAP01589 272 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 FAM157CP0CG43 387 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 HLA-GP17693 338 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 HRH1P35367 487 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 ZP2Q05996 745 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 RNASE10Q5GAN6 216 aaKnown RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 ETV3LQ6ZN32 361 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 C16orf47Q6ZP98 133 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 TRAPPC6BQ86SZ2 158 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 PHB2Q99623 299 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 RNF126Q9BV68 326 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 NUDT9Q9BW91 350 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 C8orf33Q9H7E9 229 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 CHMP1AQ9HD42 196 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 TMEM100Q9NV29 134 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 UQCC1Q9NVA1 299 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 CABIN1Q9Y6J0 2220 aa11.9□□□□□ -0.51
PDZRN3-208ENST00000479530 PQLC2LA1A4F0 135 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 LINC00587B1AMM8 73 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 SOX1O00570 391 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC16A7O60669 478 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 STK17BO94768 372 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 CRHP06850 196 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ACAA1P09110 424 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 SERPINF1P36955 418 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 PPICP45877 212 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 HSD17B7P56937 341 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 FDX2Q6P4F2 183 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms