RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 FER1L5A0AVI2 2057 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 HLA-AP01891 365 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CCR5P51681 352 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CXADRP78310 365 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RNF212Q495C1 297 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 Q499Y3 187 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 C9orf152Q5JTZ5 239 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 ATPAF1Q5TC12 328 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 ZNF227Q86WZ6 799 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 GPR119Q8TDV5 335 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RNF141Q8WVD5 230 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TMEM106AQ96A25 262 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TMEM100Q9NV29 134 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SDK2Q58EX2 2172 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TMEM131Q92545 1883 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RAB3DO95716 219 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 AKR1C3P42330 323 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 PRKXP51817 358 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 F2RL1P55085 397 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 GGTLC2Q14390 218 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 NKAPLQ5M9Q1 402 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 LPCAT3Q6P1A2 487 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 GALNT16Q8N428 558 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RPS4Y2Q8TD47 263 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TSEN15Q8WW01 171 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RNF166Q96A37 237 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SMCO4Q9NRQ5 59 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 ATXN7L1Q9ULK2 861 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SLC22A13Q9Y226 551 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CLN5O75503 358 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 WNT11O96014 354 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 AMY2AP04746 511 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SPARCP09486 303 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 TPT1P13693 172 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 PGAM2P15259 253 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 RPS4XP62701 263 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 PLCXD2Q0VAA5 305 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 WDR77Q9BQA1 342 aaPredicted RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 POTEKPQ9BYX7 375 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 NMNAT2Q9BZQ4 307 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 SELENOIQ9C0D9 397 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 LANCL2Q9NS86 450 aa12.65□□□□□ -0.38
CCDC78-210ENST00000478979 CDV3Q9UKY7 258 aaKnown RBP12.65□□□□□ -0.38
CCDC78-210ENST00000478979 ARPC3O15145 178 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 CD74P04233 296 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 FOLR1P15328 257 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 SSTP61278 116 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 ELAVL1Q15717 326 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 SLC29A4Q7RTT9 530 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 PMM1Q92871 262 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 ZBTB8AQ96BR9 441 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 ZC3H10Q96K80 434 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 HRH4Q9H3N8 390 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 METTL1Q9UBP6 276 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 NUDT19A8MXV4 375 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 MPZL1O95297 269 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 IL11P20809 199 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 CSRP1P21291 193 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 CCKBRP32239 447 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 AIMP2Q13155 320 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 MST1LQ2TV78 715 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 OR2B11Q5JQS5 317 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 FIP1L1Q6UN15 594 aaKnown RBP12.64□□□□□ -0.39
CCDC78-210ENST00000478979 OR1L3Q8NH93 324 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 METTL21AQ8WXB1 218 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
CCDC78-210ENST00000478979 A0A0B4J2A0 478 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 TLCD2A6NGC4 264 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 XKRYO14609 159 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 SLC16A7O60669 478 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 ALOX12BO75342 701 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 KLK3P07288 261 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-210ENST00000478979 MELTFP08582 738 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 SFTA3P0C7M3 94 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 SELLP14151 372 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 GABRA4P48169 554 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 ALKBH1Q13686 389 aaKnown RBP12.63□□□□□ -0.39
CCDC78-210ENST00000478979 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC78-210ENST00000478979 SCGB2B2Q4G0G5 96 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 BAP18Q8IXM2 172 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 C9orf40Q8IXQ3 194 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
CCDC78-210ENST00000478979 SLC25A21Q9BQT8 299 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-210ENST00000478979 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms