RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SLC35D3Q5M8T2 416 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 LCN1P1Q5VSP4 162 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SHEQ5VZ18 495 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SPNS3Q6ZMD2 512 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TIGD4Q8IY51 512 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 GALNT4Q8N4A0 578 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF525Q8N782 197 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TMEM163Q8TC26 289 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 KLF14Q8TD94 323 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SNX33Q8WV41 574 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 GTF3AQ92664 365 aaKnown RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SPTSSAQ969W0 71 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SLAMF6Q96DU3 332 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SLC29A1Q99808 456 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TTTY10Q9BZA0 68 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 BARX1Q9HBU1 254 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PTTG3PQ9NZH4 202 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 DNAJC27Q9NZQ0 273 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 H2AFY2Q9P0M6 372 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 CR1P17927 2039 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 CCDC182A6NF36 153 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 M0R135 149 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TIMM8AO60220 97 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ERCC1P07992 297 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ACSM4P0C7M7 580 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SLC2A1P11166 492 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PEX2P28328 305 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 HSD11B1P28845 292 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 RGS6P49758 472 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PRKXP51817 358 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 HCCSP53701 268 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TPTEP56180 551 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ELF3P78545 371 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ECH1Q13011 328 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PCK2Q16822 640 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 CLEC12BQ2HXU8 276 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 LPCAT4Q643R3 524 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SHFQ7M4L6 423 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TGIF2LYQ8IUE0 185 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ST7LQ8TDW4 575 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 THEM6Q8WUY1 208 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 APOBEC3DQ96AK3 386 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF799Q96GE5 643 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 MARS2Q96GW9 593 aaKnown RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 MBOAT4Q96T53 435 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 AMELYQ99218 206 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 CNN2Q99439 309 aaKnown RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TEAD3Q99594 435 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 DOK1Q99704 481 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 RAB1BQ9H0U4 201 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 MARCH7Q9H992 704 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 LAMP5Q9UJQ1 280 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 STARD10Q9Y365 291 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 SONP18583 2426 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 IGLV3-9A0A075B6K5 115 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 PLSCR5A0PG75 271 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 SLC22A31A6NKX4 558 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 ICMTO60725 284 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 APOL3O95236 402 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 LCATP04180 440 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 LYNP07948 512 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 CX3CR1P49238 355 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 EVX1P49640 407 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 EFNA4P52798 201 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 RSPO1Q2MKA7 263 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 TMEM255AQ5JRV8 349 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 TEX30Q5JUR7 227 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 NXNL2Q5VZ03 156 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 MBNL2Q5VZF2 373 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 CLEC2AQ6UVW9 174 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 MEPCEQ7L2J0 689 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 NAA40Q86UY6 237 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 GID4Q8IVV7 300 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 OR5AS1Q8N127 324 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF283Q8N7M2 679 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 BHLHE23Q8NDY6 225 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 OR51G2Q8NGK0 314 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 OTOSQ8NHW6 89 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 CMBLQ96DG6 245 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 DCLRE1CQ96SD1 692 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 ABHD6Q9BV23 337 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 REPIN1Q9BWE0 567 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 BRD7Q9NPI1 651 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 DDX28Q9NUL7 540 aaKnown RBP5.9□□□□□ -1.46
BRCA1-215ENST00000478531 TBCCD1Q9NVR7 557 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 SLCO1C1Q9NYB5 712 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 GPR160Q9UJ42 338 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 KLHDC2Q9Y2U9 406 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 GMPPBQ9Y5P6 360 aa5.9□□□□□ -1.46
BRCA1-215ENST00000478531 ABCA2Q9BZC7 2435 aa5.9□□□□□ -1.47
BRCA1-215ENST00000478531 H0YHG0 523 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 H7C1Q1 480 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 PSMD9O00233 223 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 TBX1O43435 398 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 SPRY3O43610 288 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 IGHV3-13P01766 116 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 MT-ND5P03915 603 aa5.89□□□□□ -1.47
BRCA1-215ENST00000478531 ANXA2P07355 339 aaKnown RBP5.89□□□□□ -1.47
BRCA1-215ENST00000478531 H2BFMP0C1H6 154 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms