RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZNF665Q9H7R5 613 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 DDX28Q9NUL7 540 aaKnown RBP19.82■□□□□ 0.76
C9orf3-215ENST00000478473 U3KQV3 271 aa19.82■□□□□ 0.76
C9orf3-215ENST00000478473 STAB1Q9NY15 2570 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 TRAV20A0A0B4J274 112 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 TNFRSF1AP19438 455 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 TNFSF4P23510 183 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 ERFP50548 548 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 DNAL1Q4LDG9 190 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 TEX30Q5JUR7 227 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 AVPI1Q5T686 147 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 ACSM5Q6NUN0 579 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 IL17RELQ6ZVW7 336 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 LINC00346Q8IVM7 164 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 CYB561A3Q8NBI2 242 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 OR2T33Q8NG76 320 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 OR2AJ1Q8NGZ0 328 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 OR4Q3Q8NH05 313 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 BCAS4Q8TDM0 211 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 ZNRF4Q8WWF5 429 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 SLC7A6OSQ96CW6 309 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-215ENST00000478473 CDADC1Q9BWV3 514 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 HIF1ANQ9NWT6 349 aa19.81■□□□□ 0.76
C9orf3-215ENST00000478473 IQCF6A8MYZ5 107 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 PHF1O43189 567 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-215ENST00000478473 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-215ENST00000478473 OR8G5Q8NG78 346 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 OR10G2Q8NGC3 310 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 OR10S1Q8NGN2 331 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 CANT1Q8WVQ1 401 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 TMEM158Q8WZ71 300 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 PITX2Q99697 317 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 G6PC2Q9NQR9 355 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 TBC1D23Q9NUY8 699 aa19.8■□□□□ 0.76
C9orf3-215ENST00000478473 SURF4O15260 269 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 CST1P01037 141 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 ZNF823P16415 610 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 PYCR1P32322 319 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 CRMP1Q14194 572 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 HLXQ14774 488 aaPredicted RBP19.79■□□□□ 0.76
C9orf3-215ENST00000478473 SLC27A4Q6P1M0 643 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 PROKR2Q8NFJ6 384 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 OR2Z1Q8NG97 314 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 OR13G1Q8NGZ3 307 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 NIPSNAP1Q9BPW8 284 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 SLC30A2Q9BRI3 323 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 CMC2Q9NRP2 79 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 TMEM106BQ9NUM4 274 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 PTTG3PQ9NZH4 202 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 NPTNQ9Y639 398 aa19.79■□□□□ 0.76
C9orf3-215ENST00000478473 DHRS12A0PJE2 317 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 IGHV2-70P01814 119 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 HLA-DQA2P01906 255 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 BLVRAP53004 296 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 PAPD5Q8NDF8 572 aaKnown RBP19.78■□□□□ 0.76
C9orf3-215ENST00000478473 GIPC3Q8TF64 312 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 SIGLEC11Q96RL6 698 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 FEVQ99581 238 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 COMMD3-BMI1R4GMX3 469 aa19.78■□□□□ 0.76
C9orf3-215ENST00000478473 IFNL4K9M1U5 179 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 GYG2O15488 501 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 FSTL3O95633 263 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 SELEP16581 610 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 LINC01590Q5TEZ4 76 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 OR2T2Q6IF00 324 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 PEG10Q86TG7 708 aaKnown RBP19.77■□□□□ 0.76
C9orf3-215ENST00000478473 ITLN1Q8WWA0 313 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 ZNF582Q96NG8 517 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-215ENST00000478473 ARMC1Q9NVT9 282 aa19.77■□□□□ 0.76
C9orf3-215ENST00000478473 TCRBV3S1A0A5B6 114 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 RNF212BA8MTL3 300 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 F5H5K5 113 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 PLPP2O43688 288 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 SOX14O95416 240 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 IFNGP01579 166 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 PSKH1P11801 424 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 SPI1P17947 270 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 FMO3P31513 532 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 GRK5P34947 590 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 TPTEP56180 551 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 GK2Q14410 553 aaPredicted RBP19.76■□□□□ 0.75
C9orf3-215ENST00000478473 TMEM155Q4W5P6 130 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 NAA40Q86UY6 237 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 LRRC28Q86X40 367 aaPredicted RBP19.76■□□□□ 0.75
C9orf3-215ENST00000478473 OR2V2Q96R30 315 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 HCAR1Q9BXC0 346 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 GCM1Q9NP62 436 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 DCAF16Q9NXF7 216 aa19.76■□□□□ 0.75
C9orf3-215ENST00000478473 DYSFO75923 2080 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 PPIAL4EA0A075B759 164 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 PPIAL4CA0A0B4J2A2 164 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 PPIAL4DF5H284 164 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 M0R135 149 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 PPIAL4FP0DN26 164 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 ZNF181Q2M3W8 571 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 LYPD4Q6UWN0 246 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 DRAM2Q6UX65 266 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 TMEM179BQ7Z7N9 219 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 PHC2Q8IXK0 858 aa19.75■□□□□ 0.75
C9orf3-215ENST00000478473 RFLNBQ8N5W9 214 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms