RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ERGIC1Q969X5 290 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 PYURFQ96I23 114 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 MEGF10Q96KG7 1140 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 PITX2Q99697 317 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 ATF6BQ99941 703 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 PLA2G12AQ9BZM1 189 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC22A4Q9H015 551 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 OR52D1Q9H346 318 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 INSIG2Q9Y5U4 225 aa12.16□□□□□ -0.46
SMARCE1-209ENST00000478349 CEACAM18A8MTB9 384 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 F5H0A9 414 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SPRY1O43609 319 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 FABP3P05413 133 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 DBHP09172 617 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 CDKN2AP42771 156 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 TPTEP56180 551 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 GNB2P62879 340 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 HIST1H3AP68431 136 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 KCNJ8Q15842 424 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 HIST2H3PS2Q5TEC6 136 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 PTCHD4Q6ZW05 846 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 HIST2H3AQ71DI3 136 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 DOK3Q7L591 496 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC26A10Q8NG04 563 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SPTSSAQ969W0 71 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 NEIL1Q96FI4 390 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 NSMCE2Q96MF7 247 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SIGLEC11Q96RL6 698 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC30A2Q9BRI3 323 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 MS4A7Q9GZW8 240 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 ZNF446Q9NWS9 450 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 KIF17Q9P2E2 1029 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 LHFPL6Q9Y693 200 aa12.15□□□□□ -0.46
SMARCE1-209ENST00000478349 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF823P16415 610 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 PRTN3P24158 256 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 SEC23BQ15437 767 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 SPATS1Q496A3 300 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 SPRNQ5BIV9 151 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 MRPL21Q7Z2W9 205 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 TSEN54Q7Z6J9 526 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 BHLHE23Q8NDY6 225 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 OR52E2Q8NGJ4 325 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 SPRYD4Q8WW59 207 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 C22orf15Q8WYQ4 148 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 NMNAT3Q96T66 252 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 C1QTNF5Q9BXJ0 243 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 MYLK2Q9H1R3 596 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 TRIM36Q9NQ86 728 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 RPRD1BQ9NQG5 326 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 B9D1Q9UPM9 204 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 PPIAL4AQ9Y536 164 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 V9GYQ6 96 aa12.14□□□□□ -0.47
SMARCE1-209ENST00000478349 F5H5K5 113 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 KRT36O76013 467 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 DIRAS1O95057 198 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 LCATP04180 440 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 HSD17B1P14061 328 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 GATA4P43694 442 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 TRAP1Q12931 704 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 BAMBIQ13145 260 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 MEP1BQ16820 701 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 AWAT1Q58HT5 328 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 SLC18B1Q6NT16 456 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 SHISA2Q6UWI4 295 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 CPLX4Q7Z7G2 160 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 KLBQ86Z14 1044 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 OR6V1Q8N148 313 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 SIGLECL1Q8N7X8 197 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 ZDHHC22Q8N966 263 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 GNPDA2Q8TDQ7 276 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 FAM107BQ9H098 131 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 OPA3Q9H6K4 179 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 MMP26Q9NRE1 261 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 CLN8Q9UBY8 286 aa12.13□□□□□ -0.47
SMARCE1-209ENST00000478349 IGHV2-70DA0A0C4DH43 119 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 F5H5P2 479 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms